Ylistrum balloti (Ballot's saucer scallop): 132543834
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Entry
132543834 CDS
T11245
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132543834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yba03021
]
132543834
03036 Chromosome and associated proteins [BR:
yba03036
]
132543834
Transcription machinery [BR:
yba03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132543834
Coactivators
SAGA/TFTC/STAGA complex
132543834
Chromosome and associated proteins [BR:
yba03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
132543834
STAGA complex
132543834
TFTC complex
132543834
SAGA complex
132543834
SLIK complex
132543834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
WDR55
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD_LRWD1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_WDR75_2nd
Nbas_N
WD40_RFWD3
VID27
LisH
LisH_TPL
Motif
Other DBs
NCBI-GeneID:
132543834
NCBI-ProteinID:
XP_060063329
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MPSSGVLSSHAEPIIPKSDVSDKQTLLAVLQFLKKNNLKDTEELLKREAGIKDDEVTPHS
TTASESDVSHALAAYKSSDDPSLYSDYYTDLKSFIDSCLDVHKVELAVILYPVFVHMYLE
LVYNGHENHAVEFFEKFHSDQEDYYQDDLRQLSTVVKREHMQGNTLMENFKSSKFVIKMS
RDSYIHLKRRLQEKKMKPLLNIVQEHLFVDVFDGMPRNKQQIQLSSGAVLGESEREANRV
KVYYGLLKEPDINIPLEEEEEAGEGDDKPKKKKQKKDPLLMKKSKNDPNAPQNNRIPLPE
LKDSDKIEKITVFREATKRVKVNSTCMPSICFYTLLNSFQGATCVEISEDSSLLAAGFSN
SAIRVFSLLNSVKLRTMKKSKDLDIIDKEAEDVLERMMDDRTASEFKVLLGHSGPVYATN
FSRDRKFLISASEDGTNLCCALFHPNSNYIATGSSDRVVRMWDNLTGNCVRILTGHKGAV
QVLCFSPDGRFLVSSGVDRCVLLWDISSGSLLANMKGHTDTVYSLAFSRDGAALASGGLD
NHVKLWDIHRVLQEVDIEADLSIPSSFTVNENPNLLFGTFPTKSTPVLAVHFTRRNLLLA
SGPLQT
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgccatcgtcaggcgtcttgtcaagccacgcagagccaattattccaaagtctgatgta
tcggataagcaaacattgctagcagtgctgcagtttttgaagaaaaataatttaaaggat
actgaggagttactaaagcgtgaggccgggataaaagatgatgaagtcacacctcattca
actacagcaagtgaaagtgatgtttctcatgccctggctgcttacaaaagttctgatgac
cctagtctgtatagtgactactatactgacctaaaatctttcattgatagctgtcttgat
gtccacaaggtggagcttgccgtgatcttgtatcctgtgttcgttcatatgtacctagaa
ctggtatataatggacatgaaaatcatgccgttgagttttttgaaaaattccattctgac
caggaggattattatcaggacgatctccgacagctgtccactgtggtgaagcgggaacac
atgcaaggaaacacactcatggagaactttaaatcaagcaagtttgtgatcaagatgtcg
cgagattcttatatccatctgaagcgacgcctacaagaaaagaagatgaaacccctgctt
aacattgtacaggaacatctatttgtggatgtttttgatggcatgccgagaaataaacag
cagatccagttatcaagtggagctgtccttggagagtcggagcgggaagccaacagagtg
aaggtttactacggcctactcaaggagccagacatcaacattcccttggaggaggaggaa
gaagcaggggagggcgatgataaacccaagaaaaagaaacagaagaaagaccctttactg
atgaaaaagtctaaaaatgatcccaatgctccacagaataacagaataccactaccagaa
ctgaaagatagtgataagatagagaagattacagtgtttcgtgaggcaacaaaacgagtg
aaggtcaactccacctgcatgccgtctatctgcttttacactttgctcaactcatttcag
ggggcaacttgtgtggagatcagtgaagattcaagtcttcttgctgcgggattctcgaac
tctgctatcagggtatttagtctgctgaattcagtgaagctacgcactatgaaaaaatcc
aaagaccttgacataatcgacaaagaagcagaggatgttctagagagaatgatggatgat
cggacagctagtgagtttaaggttttactaggacacagtggtcctgtatacgccacaaac
tttagtcgcgaccgaaagttcctgatttcagcctcggaggatggtacaaacctatgttgt
gctttattccacccaaacagtaattacatagcaacagggtcaagtgatcgagtagtcaga
atgtgggacaacttgaccggcaactgtgtccgaattctcactggacataagggagctgta
caagtattgtgtttctcaccggacgggagattcctcgtctcctcaggtgtggatcgctgt
gtactattgtgggacatttcaagtggaagtttattagccaacatgaaaggacacacagac
actgtatacagtctggcatttagtcgtgacggggcagcactggcatcaggtggtttggat
aatcacgtcaagctgtgggatatccacagagtattacaggaagtcgatatagaggccgac
ctcagtatcccaagctcctttactgtgaatgagaaccccaatctactttttggaacattt
cctactaagtccactccagttctagctgtccactttacccgaaggaacttgttactagcc
agtggcccgctacagacttga
DBGET
integrated database retrieval system
