Ylistrum balloti (Ballot's saucer scallop): 132544234
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Entry
132544234 CDS
T11245
Name
(RefSeq) ATP-dependent RNA helicase Ddx1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
yba03041
]
132544234
03016 Transfer RNA biogenesis [BR:
yba03016
]
132544234
Enzymes [BR:
yba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132544234
Spliceosome [BR:
yba03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
132544234
Transfer RNA biogenesis [BR:
yba03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
132544234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
SPRY
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
132544234
NCBI-ProteinID:
XP_060063790
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MTAFEEMGVMPEIGQAVEEMDWTLPTDVQAEAIPMILGGGDVLMAAETGSGKTGAFCLPI
MQIVYETLKDQEEGKGRKLSSKTAGSGGNAWKMNMHDRGDALAIDPEGLLCQARDQQKWH
GTRSNKAVTQEGRYYFEATVTDEGLCRVGWATDKATLDLGTDKFGFGFGGTGKKSWGRQF
DSYGQAYGMNDTIGCFLDIDNAEIRWSKNGVDLGKAYDIPPHLKSEKFYAAVTLKNAEME
FNFGKTPFKFPPGKNYVGVAQANSRCVVQSRISSGVAVSSKPAPNAPQAIIIEPSRELAE
QTFTQIQKFKVHLSNPSIRELLIIGGVNVKDQMEVLQRGVDIVVGTPGRLEDLISTGKLL
LHQVRFFVLDECDGLLSQGYSDLINRLHQQIPKVTNDGKRLQMIVCSATLHSFDVKKMAE
RLMYFPTWIDLKGQDAVPETVHHVVCKIDPTLDTRWKNLQRHIATDGVHHSDNISSSGTS
Q
NT seq
1444 nt
NT seq
+upstream
nt +downstream
nt
atgacggctttcgaagaaatgggcgttatgcctgaaattggacaggcagtagaggaaatg
gattggactttaccaaccgatgtacaagctgaagccattcccatgattcttggtggtggt
gatgtgctcatggctgcagagacaggcagcggtaaaactggagctttctgcctccccatc
atgcagattgtgtatgaaacactgaaagaccaggaagaagggaagggaagaaagctttcc
tcaaaaacagcaggttccgggggaaatgcctggaagatgaacatgcatgacagaggagat
gctttggccattgatccagagggactgttatgtcaagctcgtgaccaacagaaatggcat
ggaactcgctctaataaggcggtaacacaggaaggtcgctactattttgaggcaacagtc
acagatgaggggctatgtcgtgttggctgggctactgacaaagccacacttgatctgggc
actgacaaatttggttttgggtttggaggaactggcaagaaatcctggggcagacagttt
gactcctacggacaggcttacggcatgaatgatacaataggttgctttcttgacattgac
aatgcagaaatacgctggtcaaaaaatggtgtagacctgggaaaggcctatgatattcca
ccacacttaaaaagtgaaaagttttatgctgctgttacactaaagaacgctgaaatggag
ttcaactttggtaaaacaccatttaagttccctcctggtaagaactatgtgggtgttgcc
caagccaattctcgctgtgttgtacaatccagaatttccagtggtgtagctgtctcttcc
aagcccgctccaaatgcccctcaggccattatcatagagccttctagagaacttgctgaa
cagactttcacgcaaatccagaagttcaaagtccatctgtctaacccttctatcagggag
ctgttgatcattggtggtgtcaatgtgaaggaccagatggaggttctacagaggggggtg
gatattgtggtgggaacccctggaagacttgaagacctaatctctactggcaagctactg
ctacaccaagttcgcttctttgtgctagacgaatgtgatggcctcctgtctcaagggtac
agtgacctgattaacagactccaccagcagattcccaaggtcaccaatgacgggaaacgt
ctacagatgatcgtctgctcagcaaccctacactcattcgatgtcaaaaaaatggcggag
cgtctgatgtatttcccgacatggatagatctgaaaggtcaagatgccgtgccagagact
gttcatcatgtggtgtgcaagattgacccaacattggacacaagatggaagaatcttcaa
cgacacattgccactgatggggtccaccacagcgacaacatttcctccagtgggacatct
caag
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