Ylistrum balloti (Ballot's saucer scallop): 132544432
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Entry
132544432 CDS
T11245
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yba03019
]
132544432
03041 Spliceosome [BR:
yba03041
]
132544432
03036 Chromosome and associated proteins [BR:
yba03036
]
132544432
Enzymes [BR:
yba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132544432
Messenger RNA biogenesis [BR:
yba03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132544432
mRNA cycle factors
Common to processing body (P body) and stress granule
132544432
Spliceosome [BR:
yba03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
132544432
Chromosome and associated proteins [BR:
yba03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
132544432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
132544432
NCBI-ProteinID:
XP_060064011
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MSNVPTQNVQGLEQQFAGIDINSGRPYSGNRGDNFSHGGPKYRPNNVNPRFQEQTFYHQG
PPPNVPPPTGSRYVPPHQRDGAPVPGNFPPGSDSGGRGGYGGYNNQGRGGFNMNGMPPQT
FNQPNMGDGRGGYNNYSRGGYQGGNYGGQGGNFNSFNRRGGGQGGYQANGGGRYNGRGGG
SSDRGMRQGSMPPHQNHPPPGNSRWDNLDDDRAPREQRAGSAPSQNWNNQGNRWDNRTEC
SVVTNSRWAPEPTKENWNVALQRNDRLELELFGGGNTGINFDKYEDIPVEATGESCPKHI
ESFEETELGEIIRNNIILSKYAKPTPVQKYSIPIVLAKRDLMACAQTGSGKTAAFLVPVL
NRVYDNGPGDAPVQNNQGRYSRRKQYPVALILAPTRELASQIYDEARKFSYRSRVRPCVV
YGGADIGAQIRDLDRGCHLLVATPGRLVDMIERGKIGLDYCKFLVLDEADRMLDMGFEPQ
IRRIVEKDTMPPSGTRQTLMFSATFPKEIQILARDFLDNYIFLAVGRVGSTSENITQKVV
WVEEGDKRSFLLDLLNAAAGPEALTLTFVETKKGADALEDFLIMEGYPATSIHGDRSQKE
REEALRQFRNGDRPILVATAVAARGLDIPNVRHVVNFDLPSDIEEYVHRIGRTGRVGNLG
LATSFFNEKNKNIIRDLMDLLVEAHQEVPSWLESMAYEARPSGPASRRGGRRFGGTGFGA
RDYRQQNKPKPANPGYGNFAGSAPPTTGYNQFNTNYGNYGGSYGGSYGGAPAGNSGPDWW
GN
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgttccaactcaaaatgtgcagggtctagaacagcaatttgctgggatagac
atcaactctggtcgcccctacagtggtaataggggagataacttcagtcatggtggacca
aaatatcgacctaacaacgtaaaccccagatttcaggagcaaacattctaccatcaagga
ccacctcccaatgtgcctccaccaactggtagtcgttatgttccccctcaccagcgagac
ggtgctccggtaccaggcaacttcccacccggatctgacagtggtggtcgaggtggctat
ggaggctacaacaatcagggccgtggtggattcaacatgaatggaatgcctccccagacc
ttcaaccagcccaacatgggtgatggacgtggtggatacaacaactacagccgaggaggt
taccaaggtggcaactatggtggccaaggtggtaacttcaactccttcaatcgtcgagga
ggaggacaaggaggctatcaagccaacggaggtggaaggtacaatggtcgtggcggagga
agcagtgaccgtggcatgagacagggaagcatgcctccacaccagaatcacccaccacca
ggcaattctcgctgggataacctggatgatgatcgtgctccacgggaacaaagggctggc
agtgcaccttcccagaattggaataaccagggcaaccgctgggacaacaggactgagtgt
agtgtagtgaccaacagtcgttgggctccagaacccactaaagagaactggaatgtggct
ctgcagaggaacgaccgtctggaattggagctgtttggtggcggtaacactggtatcaac
tttgacaaatatgaagacatcccagtggaagctactggagaaagctgcccaaaacatatt
gaatcttttgaggaaacagaacttggagagatcattcgtaacaacattatccttagcaaa
tatgccaagccaaccccagtacagaagtactccatccccattgttctggccaaacgtgat
ttgatggcttgtgcccagactggatcgggaaagactgctgctttcttggtgccagtgttg
aaccgtgtgtatgacaatggaccaggcgatgcccccgtgcagaacaatcagggacgctat
tcccgaaggaagcaatatcctgttgctttaatcttggcacctacccgtgagttggcctca
cagatttatgatgaagctcgtaagttttcatacaggtctcgtgttcgtccctgtgtagtg
tatggaggagctgacattggtgcccagatccgtgaccttgatcgtggctgtcacctatta
gttgctacccctggacgtcttgttgacatgattgaacgaggcaagattggtcttgactac
tgcaaattcttagttttggacgaggctgacaggatgttggacatgggttttgaaccccag
attcgtagaattgtggagaaagacactatgcctccttctggcactagacagaccctcatg
tttagtgctacctttccaaaggaaatccagattctggcccgtgacttcttggacaactac
atcttcttggcagtgggcagagtaggaagtacaagtgagaacatcacacagaaggtagtc
tgggtcgaggaaggggacaaacgctccttccttcttgatcttcttaatgctgcagctggt
ccagaagctctgaccttgacatttgtggagaccaagaaaggtgctgatgcacttgaggac
tttctcatcatggaaggctaccctgccacaagtattcatggtgatcgctcacagaaagag
agagaagaggctctgcgacagttcagaaatggtgacaggcccatccttgtcgcaactgct
gttgctgctcgtggattggatatccctaatgttcgtcatgttgttaactttgatcttcca
agtgatattgaggaatatgtccacaggattggaagaacaggacgtgttggaaacttggga
ctggccacatccttcttcaatgagaagaacaaaaacattatccgtgatctgatggacctg
cttgtggaagcccaccaggaagttccatcttggcttgaatcaatggcctatgaagcacgc
ccctctggaccagctagtcgtcggggaggacgcaggtttggtggaactggatttggtgcc
agggattaccgtcaacagaacaagcccaagccagcaaatccgggttatggaaactttgct
ggcagtgctcctccaacaacaggatacaatcagttcaacaccaactatggaaactacggt
ggatcttatggaggctcgtatggtggggctcctgcaggcaacagtggccctgactggtgg
ggaaactaa
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