Ylistrum balloti (Ballot's saucer scallop): 132545646
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Entry
132545646 CDS
T11245
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03013
Nucleocytoplasmic transport
yba03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132545646
09122 Translation
03013 Nucleocytoplasmic transport
132545646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yba03019
]
132545646
03041 Spliceosome [BR:
yba03041
]
132545646
Messenger RNA biogenesis [BR:
yba03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
132545646
Spliceosome [BR:
yba03041
]
Complex C
Other components
EJC/TREX
132545646
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
132545646
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
TPR_19
Motif
Other DBs
NCBI-GeneID:
132545646
NCBI-ProteinID:
XP_060065325
LinkDB
All DBs
Position
Unknown
AA seq
1457 aa
AA seq
DB search
MSRLKQSYTTNNKSSTYCVKKVKDMQSLSLNLIKRSQTRQLTHRCXRILNRLXGALTWIL
TVCWTSCXNHLSVVQNLMISMCHSSKNMSQSKRHCVTSLVSNSISSRHEETPASLYTLAA
HLLQNGLIDLDSLYPHLSPPDAKIREHHQKDIDDAKAYARKLSVVILSERSEDKKDDDTV
KVDVHVTNQKLGLIEALLGLGAWSNAKQILDRLPEFFATTHKPIAVALCSLVHYMMDPVY
RMNSGLPSKILKSKVPDGGRFGSKVAQAHTFRDLHQMVLPIMRYIGPYTSCDPILMVKII
RMGKNFMGKRHSGGISPDDEVAYYGFLNMLDEALLPGMVLLPCNCCISEELWGFIKLFPY
MLRYRLYGNWKNDTYSHHAKLIRARADCMERAKYIMKRLAKENVKPSGRQLGKLSHSNPG
VVFEYVLSQIQRYDNFIGPVVDSLKYLTSLSYDVLAFCIIEAVANPEKDRMKYDDTNISL
WLQSLANFTGSICRKYNIELAGVMQYVANQLKAGKSFDLLLLREVVQKMAGIEVSEEITG
DQLDAMSGGELLRQEGGYFSQVRNTKKSSTRLKDTLLEHDLALSLCLLIAQHRDGVVFQE
GADTHLKLIGKLYDQCQDTLVQFGSFLSMQLSSEEFVKRLPDVDTLITTYHIPPDAAFFL
CRPAFTYAINSKFDELRKIDKSSKHNSSQQKMLRYIEASEFVNGPVIELVRPLYTPKVWE
DLSAPFFVTFWSLQMYDLAVPSNVYDKQNQQLNAQINAIEENKDMPQSKKKKEKERCNTL
IDKLKDEEKKQGEHVARVLNRLKNQKEQWFISRSTKNETITQFLQLCIFPRCCFTAIDAL
YCSKFIHILHDLKTPNFSTLICYDRIFCDITYTVTCCTENEAHRYGRFLCAALDTIMRWH
SNKGIYEKECASYPGFVTVFRKGTDSNNKADQLDYENYRHVCHKWQFRITKAMVSCLESG
KFIQIRNALIVLTKILQHYPRITQFGQALERRVDRLRQEEKEKRPDIYALAMGYSGQLKS
KKSSWVQEAEFHLKDKEVKSTVKTPSATSQPASAQPTNGVAENGSKKTNGEVKSQSKRTE
NGEVLSSKSKEPKESKEVKEKKSREPVEKKEKSDSKSKISSEKYPGNVEERREVTSSSKK
EKENSYKDKEEKSSKDKDKSHVEERSTKERGHSSKEVKHVKDEDTEWVAKEDRGHSSKES
NRIKEEKVRIKEEPRERKIEIKAEKTVKREDKHEKVKLKRMYDTETRDSREVRDTGRDMV
REYRESPKEREGHRERRGEEHPERASSVGSSGSHGSANIRRSPDKSPQYADERDGKRRRL
DTSATPSSSKESVRSESRERHKRSPSYEREKERDRDRRERKRESLDDRGEVETKRKKSLE
PSSSKSSSKVNGDAERHVSKSTEKSQKHDKLMSSAVFQEEEASPQRTKKDKEKSKKSDRS
DKEKSKDKSSSSKKSKK
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagactaaaacaaagttatactacaaacaacaaaagttcaacctactgcgtgaag
aaagtgaaggatatgcaaagcttgtcactgaacttaatcaagagatcacagacaagacaa
cttacacacaggtgttagagaatcttaaatcgcttatagggtgctttgacttggatccta
accgtgtgttggacatcttgttagaatcatttgagcgtcgtccagaacttgatgatttct
atgtgccactcttcaaagaatatgtcacagagcaaaagacactgtgtcacatccttggtt
tcaaattccatttcttcaaggcatgaggaaaccccagccagtctgtacacactcgcggcc
catttactgcagaacggactgattgacttggactccctctatccccatctatcgccccca
gatgcaaagattcgggaacaccatcaaaaggatatagatgatgccaaggcctatgccagg
aaactaagtgttgtaattctgtctgaacgttcagaggacaaaaaggatgatgatacagtc
aaagttgatgtgcatgtgaccaaccagaagttgggattaattgaggccttattgggactg
ggagcttggagcaatgccaaacagattcttgatcggctgcctgaattctttgccaccaca
cataagcccatcgcagtagctttgtgttctctggtgcattacatgatggaccctgtttac
aggatgaactcaggactgccaagtaagatcctgaagagcaaggtgcctgatggtggaaga
ttcggcagcaaggtggcacaggcacatacattccgagacctacatcagatggtgctgcca
atcatgagatatattggaccatatacttcctgtgacccgattctcatggtcaaaataatc
agaatgggcaagaatttcatgggaaagagacatagtggtggtatcagtcctgatgacgaa
gttgcttactacggcttcctcaacatgttggacgaagcattgttacctggcatggtgctt
ttaccctgtaactgttgcatctcggaggagctgtggggctttatcaaactcttcccatac
atgctaagatatcgtttgtatggaaactggaagaatgatacttatagtcatcatgcgaag
ctgattcgagctcgagctgattgtatggagagggccaagtacataatgaaacgtctagca
aaggagaatgtgaagccatctggacgtcagcttggaaaacttagtcacagtaacccaggg
gttgtgtttgaatatgtactgtctcagatccagagatatgacaacttcattggacctgta
gtggattctctcaaatatctcacttcactatcttatgatgtgttggctttttgcataatt
gaagcagtggcaaatccagagaaggaccgaatgaagtatgatgacacaaatatctccttg
tggctgcagagtttggcaaatttcactgggtctatctgtcggaagtacaacatagagttg
gctggggtgatgcagtatgtggccaatcagctcaaggctggcaaaagctttgatttgctg
ctcctgcgtgaagttgtccaaaagatggcaggcatagaagtttctgaagaaattactggg
gaccagctggatgccatgtcgggaggagagctgcttcgtcaagagggtggctacttttcc
caagtgagaaataccaaaaaatcatcaactcgtctgaaggatactctactggaacatgac
ttggctctttccctatgtctgctgatagcacaacatagagatggggttgtatttcaagaa
ggtgctgatacacatctcaaacttattggaaagctttatgatcagtgccaggacacgctg
gttcagttcgggagttttctgtccatgcagctgagctctgaggagtttgttaaacgttta
ccagatgtagacactctcattacaacatatcatatacccccagatgcagccttctttctt
tgtaggcctgcatttacatatgcaattaattcaaagtttgatgaactcaggaaaatcgac
aaaagcagtaaacacaactccagtcaacagaaaatgctgagatatatagaggcatcagag
tttgtcaatggtcctgtgatagagttggtgcggccactgtacactcccaaagtgtgggaa
gatctcagtgcccctttcttcgtgactttttggtccctgcaaatgtatgaccttgcagta
ccctccaatgtgtatgacaaacagaaccagcagctgaatgcacaaatcaatgctattgag
gaaaataaagacatgcctcagagtaagaagaagaaagaaaaagaaagatgtaacacactg
atagacaaactgaaagatgaagagaagaaacagggcgaacatgtggcacgtgtcctcaat
agactcaagaatcaaaaggaacagtggttcatctccagatcaacaaagaatgagacgatc
acgcagtttcttcagctgtgtatattccccaggtgctgttttacagccattgatgccttg
tactgttcaaagtttatacacatacttcacgacttgaagactcccaacttttctactctc
atctgttacgacaggatattctgtgatattacctacactgtgacatgttgtactgagaac
gaagctcatcgttatggtcgatttctgtgtgcagcacttgataccattatgagatggcat
agcaacaagggtatctatgaaaaggagtgtgccagttacccagggtttgtaacagtgttc
cgtaaaggtacagatagtaacaacaaagctgatcagctagactacgagaattatcgtcat
gtatgtcacaagtggcagttcaggattacaaaggcaatggtgtcttgtctcgagtctgga
aagttcatacagattcgcaatgctctcattgtgctcacaaagatcctgcagcactatcca
cgcatcacacagtttggccaggcactggaacgacgtgtggacagactgagacaagaagag
aaagaaaaacgaccagacatatatgcccttgctatgggatattcaggacagcttaaaagc
aaaaaatcttcctgggttcaagaagcagaattccacttgaaagacaaagaggtgaaaagc
actgtaaagacccctagtgctacatcccagccagccagtgctcagcccaccaatggtgtc
gcagagaatgggtccaaaaagaccaatggggaggtgaaatctcaatcaaagaggacagaa
aatggtgaagttttaagttcaaagtcaaaggaaccaaaggaaagtaaggaagtcaaagag
aagaaatcacgtgaacctgtggagaagaaagaaaaatcagattctaaatccaaaatatct
tctgagaagtaccctggaaatgttgaagagaggagagaagtaacatcaagctctaaaaaa
gagaaagaaaacagctataaagacaaagaggagaagtcatctaaagataaagataagtct
catgtggaggaaaggtcaacgaaagagagaggtcatagtagcaaagaagttaaacatgtc
aaggatgaggacacagagtgggtagccaaagaagatcgaggccactcctcaaaagagtca
aataggattaaagaggagaaagtccgtattaaagaggaacccagagaaaggaaaatcgaa
ataaaagcagaaaaaacagtgaaacgtgaagacaaacatgagaaggtgaaactgaaaaga
atgtatgacactgaaacgagggacagcagagaggtgagagatacaggcagggacatggtg
agggagtatcgggagtcacccaaggagcgggaaggccatcgagagagacgaggagaggaa
catcctgagagagcttccagtgtaggttccagtggtagccatggatccgccaacattcgt
cgtagcccagacaagtcgcctcaatatgcagatgaacgagatggaaaacgacgtcgcctg
gacacctctgccacaccttcaagttccaaggaaagtgttcggagcgaatcacgagaaaga
cacaagcggagtccatcatatgagagggagaaggagcgagacagagataggagggaacga
aaaagggaaagtctagatgatcgaggtgaggtggagacaaagaggaagaaaagtcttgag
ccgtccagtagtaaatcaagttcaaaagtgaatggagatgcagaaagacatgtcagcaaa
tctacagaaaaatctcagaaacatgacaaattgatgagttcggcagtatttcaggaggag
gaggcatcgccacagagaacaaaaaaagacaaggaaaagtccaagaaaagtgaccgtagt
gacaaggaaaagagtaaagacaaatcgtccagttcaaagaagagcaaaaaatga
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integrated database retrieval system
