Ylistrum balloti (Ballot's saucer scallop): 132545979
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Entry
132545979 CDS
T11245
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132545979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
yba03041
]
132545979
Spliceosome [BR:
yba03041
]
Complex B
Other components
Prp19-related factors
132545979
Complex C
132545979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
RRM_YTH1
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH_4
zf-CCCH
RRM_3
zf-CCCH_10
RRM_PARP14_3
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
132545979
NCBI-ProteinID:
XP_060065645
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MAASKGANTYNRQNWEESDFPILCQTCLGDNPYIRMMKEKYGKECKICARPFTVFRWCPG
ARMRFKKTEVCQTCSKIKNVCQTCLLDLEYGLPVQVRDAALKIQDNMPKSDVNKEYYTQN
MENEIANGDGTVAPGQLGKAQTPSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHDKPTDPDDPLADQNIKDRFYGMNDPVADKLMNRYSNMPKLDAPEDKSITTLYVGNLG
DKIGETELRDHFYQFGEIRSINIASKQQCAFVQFTTRQAAENATEKSFNKLIMGGRRLNI
KWGKSQAQLGITKKDGEDSEKALEPVPGLPGALPPPPEEIANNFFNLPNAPNHLPMPPGP
PRGMPPRLVPPGAHMMPFGMFRGPPPPGVRLPPPPPGMMPMRPPPRVMMGSAMPVHYPSQ
DPTRMGAVTTSSKS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttctaaaggagcgaatacgtacaatcgacagaattgggaagagtctgatttt
ccgattttatgccagacatgtctcggagacaatccttacatacgcatgatgaaggagaaa
tatgggaaggaatgcaagatttgtgcacgtccttttacagtgttcagatggtgtcctggt
gcacgtatgaggttcaaaaagactgaagtgtgccaaacatgttcaaagataaagaatgtg
tgtcagacttgcctcttagatcttgagtatggcttacctgtgcaggtgagagatgcagca
ttgaagatccaagacaacatgccgaagtctgatgtaaacaaagagtattacacacaaaac
atggagaatgagatcgcaaatggtgatggtactgttgcacctggacagttgggtaaagct
cagactccaagtgacatgcttctgaaactggcccgtacaacaccctactacaaacgaaat
agacctcatatctgctccttctgggtgaagggggagtgtaagagaggagaggagtgtccc
tacagacatgacaaaccaacagatcctgatgatcctctagcagatcaaaacataaaggac
agattctacggaatgaatgaccctgtggcagacaaactcatgaaccgctacagtaatatg
ccaaagttagatgctccagaagataaatccatcacaactctctatgttggaaatcttggg
gacaaaataggagagaccgaactcagggaccacttttaccagttcggagaaatcagatca
atcaacatcgccagtaagcagcagtgtgcatttgtgcagttcacaacaagacaggcagct
gagaatgccacagagaagtcttttaataaactgattatgggtggaagacgtctcaacatt
aagtggggtaaatctcaagcccagctaggaatcacaaagaaagatggagaggactcagaa
aaagctcttgagccagtacctggtcttccaggggccttgcctccaccaccagaagaaatt
gcaaataatttctttaatttacccaatgcccccaaccaccttccaatgccacctggtcct
ccaagaggaatgcctcctcgtcttgttcctcctggtgcacacatgatgccatttggaatg
ttcagaggacctcccccaccaggtgtgaggttacctccccctcccccaggaatgatgccg
atgcgtccccctccaagagtgatgatgggttccgccatgccagtacactacccctcacag
gacccaacaagaatgggtgctgtcaccacaagcagcaaatcataa
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