KEGG   Ylistrum balloti (Ballot's saucer scallop): 132546262
Entry
132546262         CDS       T11245                                 
Name
(RefSeq) nucleoporin NUP188-like
  KO
K14311  nuclear pore complex protein Nup188
Organism
yba  Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:yba00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    132546262
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:yba03019]
    132546262
Messenger RNA biogenesis [BR:yba03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     132546262
SSDB
Motif
Pfam: Nup188_N-subdom_III Nup188_N VMAP-M1
Other DBs
NCBI-GeneID: 132546262
NCBI-ProteinID: XP_060065957
LinkDB
Position
Unknown
AA seq 1787 aa
MAGTGGSNQPAAKPDSFGNRSLWQLINGTGVLRPKELVSRELTRNGKKILEGISFYKKPV
TIAGEQLKGKKLSKLHKDLVQKISQFLGLEELQSLDLFSSFLSNDYRGSQKNLQHILNNE
RHTQALVYKIRDYYFTERLYLLQCVKVVINFWQDDDHPYKEELEQFMRRLTTDSDIMEKI
LDQFKGCIKEQLPTWETNGTMMTERQAHVWAHQNLLEQCELLEILVIFLKDLEINTDQAI
NLVEMFKRHGFGRHQKYKHILEDPAEPFIKKIGHLEMLILLETLDLEMVHGCIHLGSFDG
HSILKDPSSFKRLDEVIQTLGSDPSHGPLLLSWVAIRMVYPTETDNAVTRKMGNSALALR
VFDVLYEILNTEPFTSKTSFVSSVAHYIVYNMLVNLLSAFDEDSLGGEREIKVLYANICK
LLKQEFVAEDFWNKGLEEGLGSVFHSSRLKFPLDFGNLVQFSTSLALSGMDSARKIVEVW
RKLPCYTEFLDRNSVSDINQTKDPLIWQLARNKIPYPGGSFKIDAGSFGQCLPGKRDDTE
SPIIQWDVEFNGWELLLCEIETLLQQISLGAGMVSLVQVSRVTLIVEMVGAVLGAYPESM
EELDQIIECLYQLIHRFASFNPPPLDLMTSCIQCLTSVARKHPTKVWHNMKQTGMVPYLT
ENVDNLAEVLSGQGLSAGLYGAILAGYECNQGRYPVTMAFLDFISCFIKPFFAKERENDL
MAPILYFLREVFPVFQKWRYYSSAKRETIGQKCLDIFHQILTFLTENRKKKSNRPHLQEV
CVYSLLFTEAGRSLLELIAMGADTIEMALLQQGSFVEAGTGAEMIQLVQMSFSVLNRLLL
LKSPDQPLSPLESALSSQPAGRQTQHIVATIASYIYHKHNPRLPALACLLLKRLALVSRM
SILACLGGDAETIRDMYLSRLHAVTEDLRLKVVILELLSVCVEAQPGLIEIFLNVQPAES
SIAMGSDTSTSRANKKDLSLGKTSCLQTVLDLMDVKKQGEYMCPPDLLCACMDFIHALWA
GLRDTAMSVLRARANFWLSVSAPLMRNLPAPGEEDDSQIAVPDQVRTIAFVLRILSEEIY
TVTSAKLDSKLKKVLTDISDANRWKYWSSYIRDRVVAQAEKTESESSTDNLADHPTLQLL
MAWKNFVITIAKLKIDELKMNNSLKEVIMVDLIEGLQALVVGDFSALNIKLAQISSAFLF
NLIKLWTSSLSNQTRMIKELQAAIVHTLSNSKTLIPPIQVGLLGSITAIIQHTRLSSVVE
MSPDKYLSVILPTTCAVLLQSTRQLPSPQDLVDQKDTQGELAAGNIRLKMQIVTCCLLEE
LILQCDRSEMWLPVLQEHFILPTLMASMEVFIKGKQAVHYVQTVFLLLLTIAKYNKGAEA
LAMSGVTQYTCLSMISLYQDSDLFAKPGAPARKDVGELHQNSRATWHGIYCICVEMYATV
LSALKYSFLEDALHFVGAHQDRMQQCLELSRITLTPGALYEAEKTCDFIHQLSHFAREWR
LHLSDSLVKLQTSMVYMSQSFIAFLIWPTYLQHIIEQHSGQKGQTRERTSTSPKQPRLQA
QSSMEDIDTPSSQLLHTQHRMLTILGMSFSSLRQFTPDLLEILYEQSMDYSEYEPFLALG
FSAPSVDQDSTPTFGTLTTCVRDVCVKFLTKLEPKPGSSPQRSVSPVNAISQIIPKSLVL
YVMENALYIIMSQATRYLRDPQLVSTDKQLLKRELGTEMNYFLKELERYLRKGTPASPNT
SSNSLSPRTAQSGAPLLGRSISQTSFAISQETEFFRFVREYVTQVLK
NT seq 5364 nt   +upstreamnt  +downstreamnt
atggcgggcactggaggttcaaatcagcctgctgcgaaaccggatagctttggaaataga
tcattatggcagctaataaatggaacaggagttctgcgtccgaaggaattggtgtccaga
gaactaacaaggaatggaaaaaagatattagaaggcatatctttttataaaaagccagta
actatagcaggagaacaactgaaagggaagaaactctccaagctacacaaagacctcgtt
caaaagatcagtcagtttttgggacttgaagagttacaaagcttggatcttttcagctct
ttcctatctaatgattacagaggatctcagaaaaacctgcagcacatcctcaacaatgag
cgtcacacacaggccttggtgtacaagatccgggactattactttacggagagactttac
ttgctacagtgtgtgaaggttgtcataaacttctggcaggatgatgaccatccctacaag
gaggagcttgaacagtttatgagaaggctgacaactgattcagatattatggaaaagata
ttagatcaatttaaaggatgtatcaaggaacagttgcctacctgggagaccaatggaact
atgatgacggagagacaggctcatgtatgggctcatcagaatttgttggaacagtgtgag
ttactggaaattttggtgattttcttgaaggacctggaaataaacaccgaccaggccatc
aacttggtggaaatgtttaagcggcatggtttcggcagacatcagaagtacaagcacatt
ctggaggatccagctgagccttttatcaagaagattggtcatttggagatgttgatatta
ttagaaacccttgacctggagatggttcatggttgtatacacttgggcagttttgatgga
cattccattcttaaagatccaagttcatttaagagactagatgaggtgattcagactcta
gggtcggacccttcccatggtcctttgctgctctcctgggtggctattcgtatggtatat
cccacagagacagacaatgctgtcaccaggaagatgggtaatagtgctctggcgctgcgt
gtgtttgatgttctgtatgaaatcctcaacactgagccatttaccagcaaaacatctttt
gtgtcatctgtagcccactacatagtgtataacatgctggtgaacttactctccgcattt
gatgaggattccttagggggcgagagagaaatcaaggtgctgtatgcaaatatttgtaaa
ctgctgaaacaagaatttgtagcagaagatttctggaacaagggcctggaggaaggttta
gggtctgtatttcattcctcacgtctcaagttccccttggattttggtaacctggtccaa
ttcagcacctccttggccttgtcgggtatggacagtgctaggaagattgtagaagtttgg
agaaagcttccatgttatacagagttcctggatagaaatagtgtatcagatataaaccaa
accaaggatccactcatatggcagctggcgagaaacaaaatcccttacccaggaggcagt
tttaagatagatgctggatcatttggacagtgtttgccaggaaagcgagacgatactgaa
agccctatcatacagtgggatgttgagttcaatggctgggaacttttgttgtgcgagata
gaaacactgctacaacagatatcactgggtgcaggaatggtctcactagtccaggtatct
agggtgactcttatagtggagatggtgggagctgtccttggagcttaccctgagtctatg
gaggaactcgaccagatcattgaatgtctgtatcagcttattcacaggtttgctagcttt
aatccaccaccacttgacctgatgacatcatgtatccagtgtctgaccagtgtggcaaga
aaacaccctaccaaggtttggcataacatgaagcagaccgggatggttccctacctcaca
gaaaatgtggacaacttagcagaggtactcagtggccagggtcttagtgcaggcttatat
ggagctatcctggcaggatatgaatgtaaccaaggccgatatcctgttaccatggcattc
cttgactttatcagctgcttcataaagccatttttcgcaaaggagagggagaatgacctg
atggcccccatcctttattttttacgagaagtgttccctgtgttccagaagtggcgttat
tacagctcagcaaagagggagaccattgggcaaaagtgtcttgacatatttcaccaaatc
ctgacgtttttgaccgaaaacaggaaaaagaagtccaacagacctcatctacaggaagtg
tgtgtgtacagtctgttgtttacggaggctggccgttcacttctggagctcattgccatg
ggagcagacaccatagaaatggctctcctacaacagggaagttttgtggaagctggtaca
ggagcagagatgatacagctggtacagatgtcattctccgtcctaaatcgtctgctgctt
ctgaaatctcctgatcagccgctgtccccattggagagtgccctgtcctcacagcctgcg
gggagacagacacaacacattgtagccaccattgccagttacatttatcacaaacacaat
ccaagactgcctgctcttgcctgtcttctcctcaaacgattggctctggtgtcacgaatg
tccatcttggcatgtcttggtggcgatgcagagaccatcagggacatgtacctctctcgt
ttacatgctgtcacagaggatctgcgtctgaaggtagttatccttgagctgctctctgtt
tgtgtggaggcccagccaggccttatagagatcttccttaatgtccagccagctgagtcc
tccatagcaatgggctcagatacatctacatcacgcgccaataaaaaggatttatcattg
ggtaaaactagctgtctccagacagtactagatctgatggatgttaagaagcagggcgag
tacatgtgtcccccagatctgctgtgtgcctgcatggacttcatacacgctctgtgggca
gggcttagggacactgccatgtctgtactcagagcaagggccaacttttggctgagtgta
tctgcccccctgatgagaaacttgccggcccctggagaggaagacgattcacagattgct
gtgcccgatcaggtacgaacaattgcctttgttttgaggatactttcagaggagatatac
actgttaccagtgcaaagcttgacagcaaattgaaaaaggttttaactgatatcagtgat
gcaaaccgctggaagtattggtctagttacatacgagacagggtggtggcacaagcagag
aaaactgagtcagaatcttcaacagacaacctggcagatcacccaactcttcagctcctc
atggcctggaaaaactttgtgataaccattgctaaacttaagattgatgagttgaagatg
aacaacagtctaaaagaagtgatcatggtggacttaatagaaggtctacaggctctggtt
gtgggtgatttttctgcactcaacatcaaactggcacagatatcaagtgctttcctcttc
aacctgatcaaactttggaccagttctctgagtaaccagacaaggatgattaaggagcta
caggcagctatagttcatactctgtctaatagtaaaactctgatcccgccgattcaggtg
ggactgctgggaagtatcactgccatcatacaacacactcgactcagctcagtcgtagaa
atgagccctgacaagtacctgtctgtcatcctccctactacatgtgcagtccttcttcag
agcacccgccagctcccttctccacaagaccttgttgatcagaaggacacacaaggagaa
ctggcagctggaaatataagattgaagatgcagattgtgacttgttgtctgctggaggag
ctcatcctacagtgtgacaggagtgagatgtggctacctgttctacaagaacacttcatc
ctgcccacactcatggcctccatggaagtcttcatcaagggtaaacaagctgtacactat
gtccagactgtctttctgctactgttgaccattgccaaatacaacaagggtgctgaagct
ctagctatgagtggtgttacacagtatacctgtctgtctatgatatctttgtatcaagat
agtgaccttttcgccaaaccaggagctcctgctaggaaggatgtgggtgaacttcatcag
aattccagggccacctggcatggtatatactgtatttgtgtagaaatgtatgccactgta
ctgtctgccctgaagtactccttcctcgaggatgccctccactttgttggtgctcaccag
gaccggatgcagcagtgtctggagctgtcacgaatcacattgactcctggagccctgtat
gaggcagaaaagacatgtgactttattcaccaactgtcacactttgcgcgggaatggagg
ctgcatctgtcggactcgctcgtcaaacttcagacaagcatggtttacatgagtcagtcc
ttcatagcattcctcatttggccaacatatctacagcatataatagagcaacacagtggt
caaaaaggtcaaaccagagaaaggacgtctacctccccgaaacaaccacgtctacaggct
cagtcctctatggaggacattgatacgccgtcatctcagctactccacacacagcacagg
atgctgactattctaggaatgagtttttcatctttaagacaatttacaccagatctactg
gaaattctgtatgaacagagtatggattacagtgaatatgaaccatttctggcgctgggc
ttcagtgcgccctcagtggaccaagacagcacacccacatttggtacactgaccacgtgt
gtccgtgatgtttgtgtcaaatttcttactaagttggagcctaagccaggatcttctcct
cagagatcagtctctccagtcaatgccattagtcagatcatcccaaagagtctggtgctg
tatgtaatggagaatgccctatacatcatcatgtctcaggctacacggtatctacgagac
cctcagctcgtttcaacagataaacagctgctgaagagagaactaggcactgaaatgaat
tactttttgaaggagcttgaacgttatctgagaaaaggaacaccggcatcccctaacacc
agttcaaacagtctcagtccacggacagcccaatcaggagctcctctcctgggacgctcc
atctcacaaacatcatttgcaatcagtcaagaaacagagttcttccgatttgtgcgggag
tatgtaacacaggtgctaaagtaa

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