Ylistrum balloti (Ballot's saucer scallop): 132546575
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Entry
132546575 CDS
T11245
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba04140
Autophagy - animal
yba04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132546575
04148 Efferocytosis
132546575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
yba04131
]
132546575
Membrane trafficking [BR:
yba04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
132546575
Hops complex
132546575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_5
zf-RING_16
zf-RING_11
PspA_IM30
zf_RING_Vps8_fungal
zf-RING_Vps41
ACBP4_C
zf-C3H2C3
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
132546575
NCBI-ProteinID:
XP_060066277
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MASILDQYEEESARAASVRTTMPPVQEPIGPGFIDARLDTDVPIFSKKKVNFKPPDPITH
MAVCNNFLVISMTSNILLRLDLEHPETPDEVELPRAVEDKVYKIFLDPTGRHLIVSMEST
ENYYLSRNSKKPRPIGKLKGHHVHAVGWNLQNANDNTTGAILLGTSKGLIFETELTDNEN
SRFFQGSLDQYLKQLFNLGKSKAVAITGLEFDRMPSDAMTEYKYFIMITTPGRLYQFIGN
VSKSSEPPMFQPLFQQYENKPEQFLELPGDFGNSELKLYLPRFRAAPKNFAWMTGPGVYY
GDVEVTGAAGPSTVTTNTKLMPYPRDPDERGTNPQAMALTEFHVLLLFPDRIKVVCVLNE
QPIFDDIYPDRLGRLLGLCKDPLKGSLWTFTSQSVFKYKIVRESRDVWQMYLDMGKFDLA
KDYCRDNMAQMDRVLTKQAEYLFTNERYEESAMMYAQTQNSFEEIALRFIKLDKKDALKS
FILKKLESLKPQDKTQLTMLVTWLVEIYLNQLGELKEAGRDQTAEYDGLQEQFRKFLNEV
RVKECVSNNRGVVYDLIASHGDVEDMVFFAFLMQDFEKVITHYLQHDEYRNALKVLTKHC
SADVDLFYKFSPLLMQNIPQETVTDWIKLKNNLEPLRLIPALVQYDHNRYRQQGNEAIRY
LEFCIQDMENTEQAIHNYLLSLYAKLQPDKLMTYLQMQGTDPESICYDLKYALRLCAEHK
HKKACVHIYSLMGLYEEAVDLALAVDVDLAKHQADKPDEDDLDLRKKLWLRIARHVVEEE
KDVKRAMEFLHDCDLLKIEDILPFFPDFVTIDHFKDAIITSLKEYNQHIEALKEEMDEAT
GSAEEIRKEIQGFRNKFAFVKSVDKCAACGFPLMTRGFYLFPCQHKFHSDCLIGEVVPNL
SSKKRSRVEDLQRKLAEHEDIGPHSMSSRQGQGPNLKIMEIKSELDDLVASECIYCGDMM
VRSVEKLFIEEDEEELANNGWL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcttccatcctcgatcagtatgaggaagaatctgcgagagcagcatcagtccgcacc
acaatgccacctgttcaggagccgattggacctggattcattgatgccagactagataca
gatgttccaatttttagtaaaaagaaggtcaacttcaaaccgcctgaccctataacacat
atggcagtatgtaacaacttcctggtgatatcaatgaccagtaatatcttactgcgcctc
gacctcgaacatcctgaaacaccagatgaggtggaacttccaagagctgttgaagacaag
gtttacaaaatttttcttgacccaactggcagacatcttattgtcagcatggaatctact
gagaattactatctctcccgtaactcgaagaagccacgtcccataggcaaactaaagggt
catcatgtgcatgcagttggttggaacctacagaatgccaatgacaacacaacaggtgcc
atcctcctgggcactagtaagggtctgatatttgaaacagaattaacagataatgaaaac
agtcgttttttccagggaagtttggaccaatacctgaaacagttgtttaacctgggtaaa
tccaaggctgttgcaatcacaggactggagtttgacagaatgccatctgatgctatgact
gaatataaatattttatcatgatcaccactccaggtcgtctgtaccagtttattggaaat
gtgtccaagtcgtcggagcccccaatgttccagcctctgttccagcagtatgaaaacaaa
ccagaacagttcctagagctgccaggagactttggaaatagtgaattaaagctgtaccta
ccaagattccgagctgctccaaagaattttgcttggatgactggaccaggagtgtattac
ggggatgtagaagtgactggggctgctggcccctccaccgtcactaccaacacaaagctg
atgccttacccccgtgacccagatgagaggggcactaacccccaggctatggctctgaca
gaatttcatgtcctgttgctcttccctgaccggatcaaggttgtctgcgtcctgaatgaa
cagccaatctttgatgacatttaccctgatagattgggacgtttactaggactttgcaaa
gacccgcttaaaggcagtttatggacttttacatctcagagtgttttcaagtacaaaatt
gtacgagaatcacgggatgtatggcagatgtaccttgatatgggcaagtttgatcttgcc
aaggattactgtcgggacaacatggcccagatggaccgtgtacttaccaaacaggcagag
tatttgttcactaatgagaggtatgaagaaagtgctatgatgtatgcccagacacaaaac
tcatttgaggaaattgctcttcgattcatcaagcttgacaagaaagatgcactcaagtca
tttattctgaaaaaattggagtcccttaaaccacaggacaagactcagctaaccatgttg
gtgacatggctggtagagatttacctgaaccaacttggcgaactgaaagaggctggtcgg
gaccaaacagctgaatatgatggcttacaagaacagtttcgaaagttcctcaatgaagtc
agagtcaaggagtgtgttagtaataaccgaggtgtggtgtatgatctcattgctagtcat
ggtgatgtggaggatatggtcttctttgccttcctaatgcaagactttgagaaagttatc
acacactacttacaacatgatgaatacaggaatgctctgaaagttcttacaaagcattgt
tcagcagatgttgacctattctacaagttctctccgctgttgatgcagaacattccacaa
gagacagtcactgattggatcaagctgaaaaataacctggaacctctgcgccttattcca
gctcttgtacaatatgaccataacagatacagacaacaggggaatgaggcaatacgctat
ttggagttctgtattcaagatatggagaacacagagcaagctatccacaactatctactg
tcactgtatgcaaaactacaacctgacaaattgatgacttacctacagatgcagggtacg
gaccctgaaagtatctgctatgacctgaagtatgccctgcgtttgtgtgctgaacataaa
cacaagaaggcctgtgtccacatctattcccttatgggactgtatgaggaggctgttgac
cttgccttggcggttgatgttgacttagcaaagcaccaggcagacaaaccagatgaagat
gatctagacctccgtaagaaactctggctcagaatagccagacatgttgttgaggaagaa
aaagatgtcaagagagcaatggagtttctccatgactgtgaccttctcaaaatagaagac
atcttgcctttctttcctgattttgtcacgattgatcactttaaggacgccatcatcacg
tcactgaaggaatacaaccagcacatagaggctctcaaggaagagatggatgaagcaaca
ggaagtgctgaggaaatcagaaaagaaattcaaggatttcgcaacaaatttgcctttgtg
aagtcagtggacaaatgtgctgcctgtggtttccctcttatgactcgtggattttatctg
tttccatgtcaacacaaatttcattctgactgcttaataggggaggttgtacccaattta
tcaagcaaaaaacgatcacgtgtggaagatctacagaggaagttggctgaacatgaggac
ataggaccccatagtatgtctagtcgtcaaggtcaaggtccaaaccttaaaataatggag
atcaagtcggagttggatgatttggtggcttctgagtgtatctattgtggagacatgatg
gtcaggtctgtggagaaattatttatagaggaggacgaagaggaactcgcaaacaatgga
tggttataa
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