Ylistrum balloti (Ballot's saucer scallop): 132546713
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Entry
132546713 CDS
T11245
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132546713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yba03021
]
132546713
03041 Spliceosome [BR:
yba03041
]
132546713
03036 Chromosome and associated proteins [BR:
yba03036
]
132546713
Transcription machinery [BR:
yba03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
132546713
Spliceosome [BR:
yba03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
132546713
Complex B
132546713
Complex C
U2 SnRNP specific factors
132546713
Chromosome and associated proteins [BR:
yba03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
132546713
TFTC complex
132546713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
132546713
NCBI-ProteinID:
XP_060066413
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MYLYNLTLQRSTGISSAIHGNFSGSKLQEVVVSRGKMLELLRHDPNTGKIYPILSVEVFG
MIRSLMPFRLTGGNKDYIVVGSDSGRIVILEYIPQKNMFEKVHQETFGKSGCRRIVPGQY
MAVDPKGRAVMIGAVEKQKLVYILNRDAQARLTISSPLEAHKANTLVYHMVGVDVGFENP
TFACLEIDYEDADTDPTGEAGQQTQQWLTYYELDLGLNHVVRKYSEHLEEHANFLVSVPG
GSDGPSGVLICSENYITYKNLGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLEVDDEMVVEIHLKYFDTVPVSASMCVLKSGFLFVASEFGNHHLYQ
IAQLGDDDDEPRFSSNQPLEEGETFFFSPRPLKNLVMVDEMDSLSPITSCQIADLANEDT
PQLYTLCGRGSRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKNIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTISCSQLGDDALVQIYPDGIRHIRSDKRVNEWKTPG
KKNIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKDMSSDVVCMALGRVPVGEQ
RCRFLAVGLADNTVRVVSLDPTDCLSPLSMQAMPEPPESLCIVEMGGTEAKEETGETGSV
GGLFLNIGLQNGVLLRTVLDTVTGDLSDTRTRYLGLRPVKLFRISMQGSEAVLAMSSRSW
LSYTYQNRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVSYP
LQYTPRKFVIHPESSNLVIIETDHNAYTEATKMERKQQMAEEMVESVNEEQREMAAEMAA
AFLNEELPETIFGSPKAGSGMWASLIRVINPITGQTLDKVQLEQNEAAHSIALVKFASRG
DDVFVLVGVVKDLVLNPRSLGGGYVYTYQLKDGEKLDFLHKTSMEDMPGAIASFQGRALI
GVGKYLRIYDIGKKKLLRKCENKHVPNFIVSIHTLGNRVVVADVQESFHFVRYKRQENQL
IVFADDTNPRWITASCMLDYNTVSGADKFGNITIIRLPTDISDEVDEDPTGNKALWDRGV
LNGASQKTEIVSNFHIGEVVTSLQKATLIPGGSESLVYTTLSGGIGMLVPFTSHEDHDFF
QHLEMYMRSEHPPLCGRDHLSFRSYYFPVKNVIDGDVCEMFNSIDISKQKALSEELDRTP
SEVSKKLEDIRTRYAF
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgtacaacttaaccctgcagagatccacagggatctcttcagcgatccatggc
aacttctcaggctcgaagttgcaagaggtggtcgtgtcgaggggaaagatgttggagctt
ttgcgtcatgatcccaacacggggaagatctaccccatcctctctgtggaggtgtttggc
atgatacgatcactaatgccattcagacttacaggtggaaacaaagattatattgttgtt
ggttcagactcgggaagaattgttatattggaatacatcccccaaaagaatatgtttgaa
aaggttcatcaggaaacatttggaaagagtggttgtcggagaattgtgcctggccagtat
atggcagtagatcctaaaggcagggctgtcatgataggagcagtagagaaacagaagctt
gtgtacatcttgaacagagatgcccaggcacgtctaaccatatcctctcccctagaggca
cacaaagccaacacactagtctaccacatggtaggagtggatgtaggctttgaaaaccct
acatttgcctgtcttgaaattgactacgaggatgccgacacagaccctactggagaggca
ggacaacagacccagcagtggcttacctactacgagcttgaccttggactcaatcatgtt
gtccgtaaatactctgaacatttggaagagcatgccaacttcctcgtgtctgtgccgggt
ggtagtgatggtcctagtggtgtacttatctgttccgagaattacatcacctacaaaaat
ttgggtgaccaaccagatatcagatgtcccattcctcggagaaggaatgatttagatgat
ccagagaggggcatgatatttgtctgcagtgccactcacaaaacaaagtccatgtttttc
ttcctggcacaaacagaacaaggagatatatttaaaatcacattggaggttgatgacgaa
atggtagtggagattcacctcaagtattttgacacagtaccagtatcagccagtatgtgt
gttctcaagtccggttttctgtttgttgcctcagaatttggtaaccaccatttatatcag
attgctcagctgggagatgatgatgatgagcctcgcttcagtagtaaccagcctttagag
gaaggggagacattctttttctcaccacgaccactcaaaaatcttgtcatggtggatgaa
atggacagcttgtctccaatcacctcctgtcagattgctgacttggctaatgaagataca
cctcagctgtacacactgtgtggacgtggttcacgttctaccctgagagtattacggcat
ggactcgaggtgtctgagatggctgtgtcagagttgcccggtaacccgaatgctgtctgg
acggtcaagaaaaatattgaggacgagtttgatgcctacatcattgtgtccttcgtcaat
gccacactggtcctgtctatcggagaaactgtagaggaagtgacagactctggtttcctt
ggtactactcccaccatttcctgttcacagcttggagacgatgcattagtacagatttat
ccagatggtatccgtcatatccgttcagataagcgtgttaacgaatggaaaacaccagga
aagaaaaacattgtaaagtgtgctgttaaccagagacaggttgtcatcgctctcactggt
ggagagttggtatactttgaaatggaccctacgggtcagctcaacgagtacacagaaaga
aaggacatgtcttcagatgtggtgtgtatggcattggggcgtgtgccagttggagaacag
cgctgccgatttttggctgttggattagcagataacactgttcgagtggtgtccctagat
cctacagattgcctgtccccactcagtatgcaggccatgccagaaccacctgagtcactg
tgtattgtagagatgggaggcacagaggccaaggaggaaacaggggaaactggctctgtt
gggggtctctttctcaacattggtctacagaatggtgtgttactgcggactgtgttagac
acagtgacaggtgatctgtccgacaccaggacaagatatctaggtctgagaccagtcaag
ctctttaggataagcatgcagggatctgaggctgtccttgctatgtcgagtagatcctgg
ctgagctacacataccagaatcggttccatctgacaccactgtcttatgagaccctggag
tatgcctcaggctttgcgtcagaacagtgtccagagggcattgtagccatttccacaaac
acactcaggattttagctctggagaaattaggagcagtgttcaatcaagtgtcttatccc
ctacagtacacgcctcgtaagtttgtcattcatccagagtccagtaacctggtgattata
gaaacagaccacaatgcttacacagaagccacgaagatggaaagaaagcaacagatggcc
gaggaaatggtggaatctgtaaacgaggaacagagagagatggcagcagaaatggcagca
gccttccttaatgaggaactaccagagactatttttggttcgcccaaggcagggtctggc
atgtgggcatcgctcattagagtcatcaatcctatcacagggcagacactggataaggtc
caattggaacagaatgaggctgctcatagcattgccctggtgaaatttgctagtagagga
gacgatgtgtttgtgttagtgggtgtggttaaagacttggtcctcaatccccgctctttg
ggtggtggttatgtgtacacttatcaattaaaggatggtgagaaattggatttcctccat
aaaacttcaatggaagacatgcctggagctattgcctcttttcagggcagagcactcatt
ggtgttggaaagtacctgcgaatatatgatattggcaagaaaaaattactacgtaaatgt
gaaaataagcatgtaccaaactttattgtgagtattcatacactcggaaaccgtgtagtg
gtagcagatgtccaggagagcttccactttgtgcgttacaaacgccaggaaaaccaactg
attgtgtttgctgatgataccaatcctcgctggatcactgcatcatgtatgcttgactat
aacacagtcagtggggcagacaaatttggcaatattacaatcattcgactgccaactgac
atcagtgatgaggtggacgaggatcccactggaaacaaggccctgtgggacagaggagta
ttaaatggagcttcacagaagacagagattgtgtccaacttccacataggtgaggtagta
acatctcttcaaaaggcaaccttgatccctggtgggtcagaatctcttgtttacactaca
ctctcgggtggaattggcatgcttgtgcccttcacatcgcatgaggaccatgactttttc
caacatctggagatgtacatgagatctgaacaccccccactctgtggacgtgaccacttg
tctttcaggtcctactacttccctgtgaagaatgtgatagatggtgatgtttgcgagatg
ttcaactcaatagacatctccaagcagaaggctttgtcagaggagctggaccgtacacct
agtgaggtttcaaagaaattggaagacattagaacaagatacgccttttaa
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integrated database retrieval system
