Ylistrum balloti (Ballot's saucer scallop): 132546940
Help
Entry
132546940 CDS
T11245
Name
(RefSeq) THO complex subunit 3-like
KO
K12880
THO complex subunit 3
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03013
Nucleocytoplasmic transport
yba03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132546940
09122 Translation
03013 Nucleocytoplasmic transport
132546940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yba03019
]
132546940
03041 Spliceosome [BR:
yba03041
]
132546940
Messenger RNA biogenesis [BR:
yba03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
132546940
Spliceosome [BR:
yba03041
]
Complex C
Other components
EJC/TREX
132546940
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
132546940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Beta-prop_WDR36-Utp21_1st
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
WD40_RFWD3
eIF2A
DSE1_N
Tricorn_2nd
NBCH_WD40
Beta-prop_HPS5
PAC11
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
CFAP251_N
Beta-prop_EIPR1
TRM82_WD
Beta-prop_WDR75_1st
RMC1_N
Beta-prop_ACSF4
B-prop_COPA_B_2nd
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
PROPPIN
WD_LRWD1
Beta-prop_ELP1_1st
Beta-prop_WDR41
PD40
Beta-prop_WDR75_2nd
Beta-prop_SCAP
Beta-prop_Nup120_160
Cytochrom_D1
WD40_like
Beta-prop_NWD2_C
DPPIV_N
Motif
Other DBs
NCBI-GeneID:
132546940
NCBI-ProteinID:
XP_060066652
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MSTYFENTRKYFQNNNRVRESQAHSAKVHSVAWNCDGRRLASGSFDKTVNVFMLERDRLV
KDLTFRGHGDSVDQLCWHPKHPDHLVTASGDKTVRIWDARTNKSVATVNTKGENINICWS
PDGSTIAVGNKDDLITFIDIRSHRSKAEEQFKFEVNEISWNNEGDLFFLTSGQGSIHILS
YPELKLQYSLTAHPANCICIEFDPVGKYFATGSADALVSLWDTNELVCVRTFSRLDWPVR
TLSFSHDGCLLASASEDLVIDIAEVESGEKITEIACESPTFTVAWHPKRYLLAFACDDKY
EGHRDERGSVKVFGIPSDP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacttactttgaaaacacgcgaaaatattttcaaaataataacagagtgagagaa
tctcaagcacactcggccaaagttcactctgtagcatggaactgtgatgggagacgactt
gcttctggatccttcgataaaactgtcaatgtttttatgctggagcgagatagattggta
aaagacttgacatttcgtggccatggcgacagtgtagatcagctttgttggcacccaaaa
catccagaccaccttgtcactgcaagtggagacaaaactgttagaatctgggatgcaaga
accaacaagtctgtagcaacagtcaacacgaaaggagagaacatcaacatttgttggtcc
cccgatggaagtaccatagctgtgggcaacaaagacgatctcatcacatttattgacatc
agaagtcacaggtccaaggctgaagagcagtttaagtttgaggttaatgaaatttcctgg
aacaacgaaggcgatttgttcttcctgaccagcgggcaaggcagtatacacattctaagt
tacccagagttaaagctgcagtactcactgacagcccacccagccaactgtatttgtata
gagtttgacccggtgggaaaatactttgcgacaggcagtgctgatgccctggtcagtctc
tgggacaccaatgagctagtgtgtgtacgcacattctcaagactggattggcccgttcgg
accttgagcttcagccatgatggatgtctgctagcgtctgcatctgaagatcttgttata
gatattgctgaggtagaaagtggtgaaaaaatcacagagattgcatgtgagtctccgaca
tttactgtggcctggcatcctaagcgatacttactggcttttgcttgtgacgacaagtat
gaaggacatcgtgatgaacgaggcagcgtaaaagtctttggtattcctagtgacccctga
DBGET
integrated database retrieval system
