Ylistrum balloti (Ballot's saucer scallop): 132547719
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Entry
132547719 CDS
T11245
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03030
DNA replication
yba03420
Nucleotide excision repair
yba03430
Mismatch repair
yba03440
Homologous recombination
yba03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132547719
03420 Nucleotide excision repair
132547719
03430 Mismatch repair
132547719
03440 Homologous recombination
132547719
03460 Fanconi anemia pathway
132547719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yba03000
]
132547719
03032 DNA replication proteins [BR:
yba03032
]
132547719
03400 DNA repair and recombination proteins [BR:
yba03400
]
132547719
Transcription factors [BR:
yba03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
132547719
DNA replication proteins [BR:
yba03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
132547719
DNA repair and recombination proteins [BR:
yba03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
132547719
MMR (mismatch excision repair)
132547719
DSBR (double strand breaks repair)
HR (homologous recombination)
132547719
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
TPR_AP5Z1
SPG48
REPA_OB_2
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
132547719
NCBI-ProteinID:
XP_060067506
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MATSIIQMIDNIFHQAKDTTQEEIDSICSRILNNLYVPEQSGESLNLLRQLFLILHVSLT
EPCLPKKFIATMVNMVSSMDREKTKECLLCEQMMTELLPRDREELGADFYTEDERVDPKS
VANSFTVYRIQGNKNRCIEKLIPQAVRWMCGENVEPIVQRQTFSFLVAVSLQHRLLLTEG
NIKDCSRSISKWMMLASLQQAPNPYKMKIFKKDQNSVVTEVDGTPSRNFFTVLNIGQYYT
EDQFLNIYSFSLLYKWLHQCFTVEASSSAAESDRSHVSSTSSPAHRVFDVLVNKSIDYCF
RILDQCDRKPKVQSDQDLQNACLLETVNVLDLVCKIDTGQISKVFQEMRHLYNRLSQDLG
KSRLLLPILQFYMNHSKAVLHDPQEAYRLIFHTVLSQSFMDNALMFDMVMFLRQNLEALC
HNTQILTTFFPNIFKILAWNPRTYLSEFEELLPALMSSSTALEVKHWSPRIFLDSAQPPP
QIPKQESGGQNYKGIGNQKPNTIKQSPPANPYKGNANKGGNYSMKGSSTPSTPGSNRVHT
ISSLTPYQNRWRIRARITQKGSIRTWSNSRGEGKLFSVNFTDESGEIRATGFNEAVDKYY
EMLEMNKVYYVSRGTLKTANKQYSNVQNDYEMTFNQDTVIEPCTEEVDLPGIKFQFVALN
ELDSKAANSLVDVIGVVKSCNEVGTVTGRQSQKEITKRDISIVDQSGMAVNLTLWGNDAV
TFSGDGHPIMAVKGARLSDFGGRSLSVLASSQVVMNPTDLKVAFQLRSWFDSEGQGMEFQ
SFRGEGGSGSGSGTNWMTFADVKSQNIGGGEKADYFTSKGTVIFLRKENCMYKACPTESC
NKKLIDQGNGMFRCEKCSREFPNFKWRMILSANLADFSDNQWVTCFQESAELLLGKNAQE
LGDMKDSDEASFDQVFQDAMFKPYIFKLRAKMETYNDETRLKTICVNANPINWKEYGHRL
VEEINKLAV
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccatcattcagatgattgataatatttttcatcaagcaaaagacactact
caagaagaaattgatagtatttgttcaaggatcctcaacaatctctatgttccagagcag
tctggagaaagcttgaatcttttacgacaactttttcttatcctgcatgtatcactgaca
gagccatgcttaccaaaaaagttcattgcaacaatggtgaacatggtgagttctatggac
agagaaaaaaccaaggaatgtttattgtgtgaacaaatgatgacagaactgttaccaagg
gatagagaggaacttggagcagatttctacacagaggacgagcgtgttgaccctaagtct
gtggccaactcatttactgtgtaccgaatccagggaaacaaaaacagatgcattgaaaaa
ctgataccacaagctgtcaggtggatgtgtggtgagaatgtggagcccatcgtacagaga
cagacattctccttcctagtggcagtgtctctccagcatcgacttctcctaactgaaggc
aatataaaagactgtagtagaagcatttcaaaatggatgatgttggccagtttacaacag
gcccccaacccatacaaaatgaaaatattcaagaaggaccagaacagtgtggtaacggag
gttgatggcacaccaagccgaaatttcttcactgttctcaatattggtcagtattacaca
gaggaccaattcctgaatatctacagtttttctttactgtataaatggttacaccaatgt
tttactgtggaggcctcgtcgtcagctgcagagagtgaccgctctcatgtaagctctact
tcatcaccagcacacagagtatttgatgtcctggtcaacaagtccattgactactgcttc
agaatccttgaccagtgtgacagaaaacctaaagttcagtctgaccaggatttacagaat
gcttgtttacttgagacagtgaatgtccttgaccttgtttgtaagattgacacgggtcag
atatccaaggtattccaggaaatgcgtcacctatacaacagactttcccaagacttaggc
aagtctcgcctattgctacccatcttacaattctatatgaaccatagtaaggcagtgcta
catgaccctcaggaagcctacaggctcatctttcacacagtgctctctcagagtttcatg
gacaatgctttgatgtttgacatggtcatgttcctgcgacagaatctagaggctttgtgt
cacaacactcaaatcctcaccactttcttccccaacatctttaagattctagcatggaac
ccaaggacctatttgagtgagtttgaagaactactaccagctctgatgtcatcttctaca
gcactagaggtaaagcattggtctccaagaatatttttagactctgcacaacctcctccc
cagattcccaagcaggaatcaggcggtcaaaattacaagggtattgggaatcagaagcca
aacaccatcaagcagtcaccaccagcaaacccatacaaaggaaacgccaacaaaggaggt
aactacagtatgaaggggtcttctacaccatcaacacctggcagcaatcgtgttcacacc
atctcatccctcacaccctatcagaacagatggagaatcagggcgagaataacacagaaa
ggtagcatacggacatggagtaattcacggggtgagggaaagctgttcagtgtgaatttc
acagatgagtctggagaaatacgagcaacaggtttcaatgaggctgtagacaaatactat
gaaatgctggaaatgaataaggtttactatgtgagcagaggaacactcaagacagccaat
aaacagtacagcaatgtacagaatgactatgagatgacctttaatcaggacacagtgata
gagccttgtacagaggaagtagatctacctggcattaaatttcaatttgttgctctcaat
gaacttgatagtaaagcagctaactccttagtggatgtgataggagtagtaaagagctgc
aatgaggtaggaacagtgactgggagacagagtcagaaggaaatcacaaagagggacata
tccatagtcgaccagtctggcatggctgtcaacttgacactgtggggaaatgatgctgtg
acatttagtggtgatggtcacccaatcatggctgtgaagggagcacgtctgtcagacttc
ggaggaaggtcattatctgtattagccagtagtcaggtggtaatgaaccccactgacctc
aaggttgcctttcaactgaggagttggtttgactcagagggacaaggaatggagttccag
agcttccggggtgaaggtggcagtggatcaggaagcggtactaattggatgacatttgct
gatgtcaagtctcagaatattggtggtggggagaaggcagactacttcacttctaaagga
actgtgatattcctcaggaaggagaactgcatgtacaaggcctgtccaacagaaagctgc
aataaaaaactgattgaccaaggcaatggcatgttcaggtgtgaaaaatgttccagagaa
ttcccaaatttcaagtggaggatgattttgtctgccaaccttgctgacttctctgacaac
cagtgggtgacatgtttccaagaatctgctgagctattgttggggaaaaatgctcaggaa
ctgggtgacatgaaggactcggatgaagcttcttttgatcaagtgtttcaagatgccatg
tttaagccctacatatttaagctaagggcaaaaatggaaacatacaatgatgaaaccaga
ttgaagacgatatgtgtgaatgccaaccccatcaactggaaagaatacggccaccgatta
gtggaagaaattaacaaacttgcagtatga
DBGET
integrated database retrieval system
