Ylistrum balloti (Ballot's saucer scallop): 132548826
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Entry
132548826 CDS
T11245
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03030
DNA replication
yba03410
Base excision repair
yba03420
Nucleotide excision repair
yba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132548826
03410 Base excision repair
132548826
03420 Nucleotide excision repair
132548826
03430 Mismatch repair
132548826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yba03032
]
132548826
03036 Chromosome and associated proteins [BR:
yba03036
]
132548826
03400 DNA repair and recombination proteins [BR:
yba03400
]
132548826
DNA replication proteins [BR:
yba03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
132548826
DNA Replication Termination Factors
ELG1-RFC complex
132548826
Chromosome and associated proteins [BR:
yba03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
132548826
DNA repair and recombination proteins [BR:
yba03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
132548826
Check point factors
HRAD17(Rad24)-RFC complex
132548826
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_16
Rad17
AAA_24
AAA_14
RCF1-5-like_lid
Mg_chelatase
Viral_helicase1
AAA_11
RuvB_N
nSTAND3
AAA_assoc_2
DNAX_ATPase_lid
AAA_19
MipZ
AAA_5
ABC_tran
AAA_18
Gp44_lid
AAA_28
AAA_25
AAA_30
AAA_23
MeaB
SLFN-g3_helicase
RNA_helicase
DUF815
NTPase_1
bpMoxR
MCM
FtsK_SpoIIIE
ATPase_2
Motif
Other DBs
NCBI-GeneID:
132548826
NCBI-ProteinID:
XP_060068703
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MADVEVMEVDSVESTKSKPKAGGSSGSSHELPWVEKYRPIKLQDIVGNEETISRLQVFAR
DGNVPNVIIAGPPGTGKTTSILCLARALLGPSYRDAVLELNASNDRGIDVVRNKIKMFAQ
QKVTLPKGRHKVIILDEADSMTDGAQQAMRRTMEIYSKTTRFALACNASDKIIEPIQSRC
AVLRYSKLTDAQVLKRLLEICEQESVSYTDDGIEAIVFTAQGDMRQALNNLQSTHQGFGH
VNSENVFKVCDEPHPVLVKDMLQHCVNGALEEAYKIMAHLWKLGYSCQDIMTIVFRVCKT
HSMPEFLKLEFIKEIGYTHMRIAEGVSSLLQLSGMLARLCKISAVPNSLGQ
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtagaagtaatggaagtggactctgtcgagtcaacaaaaagtaaacctaag
gctggaggaagctcagggtcgagtcatgagttaccatgggtggaaaagtatcggccgata
aaattacaagatattgttggaaatgaagaaaccatcagtcgccttcaggtgtttgcgagg
gatggaaatgtacccaatgtcatcattgctggaccaccagggacaggaaagacaacaagt
atactatgtctggcccgcgccttattagggccctcctacagggatgcagtgctggaactc
aatgcctctaatgacagaggtattgatgtggtgaggaacaaaatcaagatgtttgcacaa
cagaaagtcacactacccaaaggtcgtcacaaagttattatactggatgaagcagacagt
atgactgatggagcacaacaagccatgagaaggacaatggaaatatattcaaagacgaca
cgatttgcactcgcctgtaacgcatcagataagatcatagaacctattcagtccagatgt
gctgtgctaagatactctaagttaacagatgcacaggttctgaaacgtttactggagatc
tgtgaacaggaaagtgttagctatacagatgacgggattgaggctattgttttcacagca
caaggtgacatgagacaggcattaaataacctacaatccactcatcaaggatttggacat
gtaaacagtgaaaatgtattcaaggtatgtgacgaacctcaccctgtactagtgaaggac
atgctacaacactgtgtgaacggtgcccttgaggaggcctacaagatcatggctcatcta
tggaagctcggctactcctgccaggacatcatgacaattgtgttccgagtctgtaaaaca
cacagcatgccagaatttctgaaacttgaattcatcaaggagattggctacacacacatg
aggatagcagagggtgtcagctcattactgcagctttctggaatgttagcaagactttgt
aaaatatcagctgtgccaaattcactcggacaatga
DBGET
integrated database retrieval system
