Ylistrum balloti (Ballot's saucer scallop): 132549179
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Entry
132549179 CDS
T11245
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132549179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yba03019
]
132549179
Messenger RNA biogenesis [BR:
yba03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132549179
mRNA degradation factors
5'-3' decay
Decapping complex
132549179
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Beta-prop_EDC4L
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
Usp-48
ANAPC4_WD40
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
132549179
NCBI-ProteinID:
XP_060069080
LinkDB
All DBs
Position
Unknown
AA seq
1421 aa
AA seq
DB search
MDPADSTTSSLGTTGDTGHLLQELINLQKSHVMSSGNVTGSLPIHESMDPGNSGDGTAGN
PTLTELMKTIYDAPAPRQLITLQGSDTVNSFSVYGREVDIMASKGSSGIVTGSGGMSQAT
TGSNKVKITPVVKYDWEQLHYIGNLVAIHKNSLYAAYTLRGKSGGIVRIINRRTAERVLL
KDFTGKVIDIAFAHTDDVIFGAVDEVGNLFVYSIKETDSDKLITNLVLHVRRDKEAPRTE
YHRLIWCPFIPDDSDDSSVTESSTQDASRVLVLTHNEKAEIWNVDLVTKEYSSGPLVVHE
VQFGLILIDSHKQAIMDAAFSPDGTALATASLDGEVKFFQVNMGENMSPRCLHQWKPHDG
KPLSSLFFLDDHKYFSEDAQFWKFAVTGAMNNQELKIWTCESWTCLQTIRFSCPPGLPSN
FQLDPCMKAALDLSAKYLVLSDIRRKVLYVLQIHQESDSNTAHISSVSEFLLAQPCLSFA
IMDASKKKFKKSVTEDDSHLDDITTGELEREENEDGDSKMECGTTSGVQIKLYTVHPKTL
QELQIRFRPESSAPPLPTPSVSTISHDDTGLQDGLSDMSVSLEMSVTDIDSNKDSPGQPA
PVLLTPDVFKASPRKVTDNSILEPVRVSAGSSTSSFTHVTGLNDDFMSPRSSGDQSDITQ
TPTPKDSTPSRANPELTPGSLPLPPITSAEEQDLQTPKSKESLNSSGEVTPKAEGRLANV
CIDDLFDTQESSGRPIVGRTFDSTSSTTGFDVNDIVGPKHSSSKEYDEDDEEVAEVLGET
IEEEETSKEMIEGTQPFVEQGTQSSQGDSEGQQVLRAWPRPPDVNTESQPHPQDSYDEEG
DDDVQVEGEEICEDEDEDDDGVVNQEQNVGDLQNQTQDESSEEIEEQIEEHSEESDHNSP
KEAPVLKAADRHNISSPRDAGVPVREIHRETIREVIDKTALSQLQDHLQSVLVALEAQNS
QIQRLQDQLVEQQEQQAELQRQQIEMEQLRQMDKQPQPNIEEHLGKLESIVTSRVERMFS
QHALKENQRIQDLLQQTERRDQHRQDKLQQAVTQTVNQAILHNLEKQVKAEMRNTVVPNV
GKVLEPLKEQLHQDLAQKLTATDALLKDNISKMVRSRQTVDAIGMAAGNALQTPIQVAYR
EAFQNIVIPNFERTTQNMFQQINETFTKGSKEYIKHLDTHLDQIKQKHLEARDPVVGQMK
QLADSFRTSAETMQSSVMSAIQSQIHTDMEQSMTNLQDQVIQFVRQAVKEEVSIAVREQG
ASISDSVLTAMRSGAVTPIQVTPDPHQAQTQILQLLRQGQLNAAFQEALSASNLDLVMFV
CETVNPQQVFNQTPCPLQQPVLLSLIQQLSADLANSTELKHKYLEEAVMNLDMSNSVTRE
HLKGVLYGLIQKLKTYIASHPNAKTTRSLRMLQMASESLLK
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgccgatagtacgacttcctcacttgggacaactggagatacaggccacctc
ttgcaggagcttatcaacttacaaaaatcccacgtgatgtcttctgggaatgtgaccgga
tctctaccaatacatgaaagtatggatccaggaaattctggagatggaacagcgggtaat
cctaccctgacagaactgatgaagacaatatacgatgcccctgctccacgccagttaatt
acacttcaaggatctgatacagtgaatagcttcagtgtatatggtcgagaggtggacata
atggccagtaagggcagcagtggcattgtaacaggatcaggtgggatgtcacaggccacg
acaggcagcaataaggtgaagataactcctgtggtgaagtatgattgggaacagctccac
tacattggtaacctggtggcaatacacaaaaacagtttgtatgcagcatatactctcaga
ggtaaatcaggtggcattgtacgaatcattaatcgccggacagctgaacgggtcctgtta
aaggatttcactggcaaggttatagacatagcctttgctcacacagatgacgtcattttt
ggtgctgtggatgaggtcggcaatctctttgtatacagtattaaagaaacagattccgac
aaactgataactaaccttgtccttcatgtccgtcgtgataaagaggcacctcgcaccgag
taccaccgcctgatctggtgcccattcatcccagatgattcagacgatagcagtgtaact
gagtcctccacacaggatgcctcaagagtgcttgttcttactcacaatgagaaggcagag
atctggaatgtggacctggtgactaaggaatattctagtggtccactggtggtacacgaa
gtgcagtttggactgattctcatcgacagtcataaacaggccatcatggatgctgcattt
tcacctgatggcacggctctagcgacggccagtttggatggggaagtcaaattcttccag
gtcaatatgggtgaaaacatgtctccaagatgtctacaccagtggaaacctcacgacggc
aaaccactgtcgagcctattcttcctggatgaccacaagtacttcagtgaggatgcccag
ttttggaaatttgctgtgactggagctatgaataatcaggagttaaagatctggacgtgt
gaatcttggacctgtctacagacaatcagattttcctgcccacctggattaccatcaaat
ttccaacttgacccctgcatgaaagcagcgttagatttgagtgctaaatatctggtcctg
tctgatatccgaagaaaggtactgtatgtgttacaaatacatcaggagagtgactctaac
actgcccacatcagctcggtgtccgagtttctacttgcccagccatgtctaagctttgct
ataatggatgcgagcaagaaaaagtttaaaaaatctgtcacagaggatgattctcacctg
gatgacatcaccacaggtgaacttgagcgagaggaaaatgaggatggtgatagcaaaatg
gaatgtggtactacgtcaggtgttcaaattaagttatacactgtccaccccaagacccta
caagagttacaaattcgtttccgcccggagtcgtcagctcctccactgcccacaccatca
gtcagcaccatatctcatgatgatacaggactacaggatggcctgtcagacatgagtgta
agtctagagatgagtgtgactgacatagacagtaataaggacagcccaggacagccagca
ccagtccttcttacccctgatgtgttcaaagctagtcccaggaaggtgacagacaatagt
atcctagagccagtacgggtcagtgcaggttccagtaccagtagttttacccatgtgaca
gggcttaatgatgatttcatgtcaccacgtagttctggtgatcaatctgacatcacacaa
accccaacacccaaggactccacaccgagtcgtgccaacccggaactaacacctggctct
cttccactgccacctatcaccagtgctgaagaacaggacttacaaaccccaaagtccaaa
gagtccctcaactcatcaggagaagtaacgccaaaggctgaaggtcgactggccaacgtg
tgtattgacgacttgtttgatactcaagaaagctcgggcaggcctattgtaggcagaaca
tttgacagcaccagtagtactacagggtttgatgtgaatgatattgtaggccccaaacac
tccagttctaaagagtatgatgaggatgatgaggaagtggcggaggtgttgggggagacg
atagaggaagaagaaaccagtaaggagatgattgaaggtacgcaacccttcgtggagcaa
ggtacgcagtcatcccagggagatagtgaaggtcaacaggtgctgcgggcctggccacgt
cctcctgatgtaaacacagagagccagccacaccctcaggacagctatgacgaggagggt
gatgatgatgtacaggtggagggagaggaaatctgtgaagacgaggatgaagatgacgat
ggtgttgttaaccaggaacagaatgtaggagacctacagaatcaaacccaggatgagagt
agtgaggaaatcgaggagcagatagaggaacactcagaggaatctgaccacaacagtcca
aaggaagctccagtgttgaaggctgcagatagacacaatatctcttctccaagggatgct
ggcgttcctgtcagagaaatacatcgtgaaaccatccgagaagtcatagacaaaacagct
ctgtctcagttacaggatcacctacagagtgttttggtggcccttgaagctcagaacagt
caaatacagcggttacaggaccagttggtagagcagcaggaacaacaggcagagttacag
cgacagcagattgagatggagcagctgcgacagatggacaaacaaccacagccaaacatt
gaggaacatctgggcaagctagagtccatcgtcacatcacgggtggagcgcatgttcagc
cagcatgcgttgaaagaaaaccagcggatacaggatcttttacagcagactgagcgccgc
gaccagcatcgacaggacaagttacaacaggcagtaacgcagactgttaaccaggcaatc
ctacacaacctggagaagcaggtcaaggcagagatgagaaacacagttgttccaaatgtg
ggcaaggtgctcgagcccctgaaggaacagcttcaccaggatcttgctcagaaactgacg
gctacagacgctctactgaaggacaacatcagtaagatggtgcgatctaggcaaacagtg
gatgctattgggatggcagcaggcaacgctcttcagactcctatacaagtggcttataga
gaggcatttcaaaatattgtgatccccaactttgagcgcaccactcagaacatgttccaa
cagatcaatgaaacatttactaaaggatcaaaggaatacatcaagcatctagacacacat
ttagaccagatcaaacagaaacacctggaggctcgggatcctgtggttggacagatgaaa
caactagcagactcgtttagaacatcggcagagacaatgcagagctctgtgatgtcagcc
atacaaagtcaaatccacacagatatggagcagtccatgacaaatctacaagatcaagtg
atccagtttgtacggcaggccgtgaaggaggaggtcagtatagctgtccgagaacaaggt
gccagtatcagtgatagtgtgttaacagccatgaggtcaggggctgtgacccctatacag
gtgacccctgacccacatcaagcccagacacagatccttcaactacttcgtcaaggccaa
cttaatgctgctttccaggaggccttgtcagcatcaaatctggaccttgtgatgtttgtt
tgtgagacagtcaatccccaacaagtatttaatcagacgccttgccctctacaacagcct
gtgctgctctccctcatacaacagctgtcagcagacctagccaacagtacagaactcaaa
cacaagtatctagaggaagcagtgatgaatctggacatgtctaacagtgtcacacgagaa
catctgaagggcgtgttatatggactgatacagaaactaaagacctacattgccagtcat
cctaatgctaaaactacacgctctctcaggatgctgcagatggcttcagaatctctcctt
aagtag
DBGET
integrated database retrieval system
