KEGG   Ylistrum balloti (Ballot's saucer scallop): 132549811
Entry
132549811         CDS       T11245                                 
Name
(RefSeq) roquin-2-like
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
yba  Ylistrum balloti (Ballot's saucer scallop)
Brite
KEGG Orthology (KO) [BR:yba00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:yba03000]
    132549811
   04121 Ubiquitin system [BR:yba04121]
    132549811
Transcription factors [BR:yba03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    132549811
Ubiquitin system [BR:yba04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    132549811
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-RING_2 zf_CCCH_4 zf-C3HC4_3 zf-CCCH_4 zf-C3HC4 zf-C3HC4_2 PaaA_PaaC zf-C3HC4_4 Prok-RING_4
Other DBs
NCBI-GeneID: 132549811
NCBI-ProteinID: XP_060069767
LinkDB
Position
Unknown
AA seq 1361 aa
MPVQTPAWTEFLSCPICYKVFDGKNLCPISLACSHTICRTCLSKLQQKKCPFDQNLINKS
ISELPINHALLQLVGVAIAPNCDNNVSVPQENINNYESARHCIEALALYLKPLSTSVVPG
QVVNNGSTQVTAIGGSSVNSTGNSLNNCMLSRPMQRKLVTLVNCQLVEEEGRGRAMRAAR
SLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEVLKLILLALEDGSALSR
KVLVMFVVQRLETHYPQASKTAIGHVVQLLYRASCFVVTKREEESSLMQLKEECRTYDAL
RRDHDSQIVQIAMEAGLRIAPDQWSSLLYGDTTHKSHMQSIIDKLQTPQSFSQSVNELVI
ALQRTGDPCNLQRLRTHLEFLANIDPSPEAPPPSWENLEAVMKAVRSVVQGLVDFVKSNG
HKKLENTTVHNSRYKTSMCRDFLQKNSCPRSSNCTFAHSQEELDKYRSRTKKTGKVCNTP
PDYEDFPTSDGDSIQVSEKLKDDNFATGYGNQRSKPLPDVVTAKVLTSLAKSMSSLTFAQ
AKGLTSDKMTESSETGPRMSSIVVPGMAPLIPPPNTMQPPPVQVPRSPYPLDMYQGQRPP
TQRTHGPGVPAGSRPVFGGGQNVMTGRPGFQSMPRYMTGPYRPQYNNQPQPQPQVQYTGG
VPFRQPVDPGLTRMPFPQQQQQQPPIGFVNYNYPHNSSALNPYAEPFQGGGSRPLTPEDQ
IYPVVGNYPEGLNYQLGTMPPGQGQAKILNDLHHRRAEILNRLFNPADDLLTNSETPTYS
SNVLPQSDADDMLRGDIHSKKSMFHSSLGLYQGSLQSSQSEEQDLFKMMTGQRSMIGTLS
EQGCEGSPAGRHGSAQVDKKRGSSWQRDYNKSQLLTSSKQPTKEILGVEEYKVTNQNYSI
ASSDFSHQQEISSSSKWVMVQPANFGAHHTSEESCDMTGSAPHSTLGSSFSVQKWDKSQA
YGNRDQVQNMTNSTGKTSGHNKSDVSYWRASNNSNRNRTFHTKNDREISESSNLKPDNIY
AHQRHLIEHVSRNTSTISNPSDTPAALDTGCAVWSIDGVDDVVWNFTDTQAVSNQASEEE
DLLKEEQINSTEFMLNWLHDIPDEPTPIEPMDQFIFPLSRALDRREDDAIIPFDSTPMVS
RFGPISRSARTKYKNTEPVQVTANDVMKKVTPVTAVTPLDHPKPTAKAQPSYMSPVVETS
NTANTARWRRPSELENCVQRELSRLEQQALKADTENEFLACELKAVELQISLQTEKTVPQ
PVAEAPIIKPDIHPAVEVVVPVPVAVPVKTDSPHNPPGIWSSFELLKAAYTRGQTMDDLR
ELLKHVPIGVDKPSGPLTQQEEQLLKDVFGGEIPSSANLQA
NT seq 4086 nt   +upstreamnt  +downstreamnt
atgcctgtacagacacctgcctggacagaattcttatcctgtccaatttgctataaagtc
tttgatgggaagaatctgtgccctattagccttgcttgctctcatacaatctgcaggact
tgtctgtctaaacttcaacagaagaagtgcccatttgaccagaatctcataaacaagtcc
atcagtgagctacccataaaccatgccttactacaattggtgggtgtagccatagcccca
aactgtgacaataatgtgtctgtcccacaggaaaatatcaacaactatgaatcggcccgt
cactgtattgaggctttggctctctaccttaaaccactctccacaagtgttgtaccaggc
caagttgtcaacaatggcagcacacaggtgacagcaataggaggttcctctgtgaatagt
acagggaattctctaaacaactgtatgctgagccgaccaatgcagaggaaacttgtgact
ctggtcaactgtcagttggtggaggaggaggggcgtggcagggccatgagagctgcccgg
tcacttggtgaacgtacagtgacagagctcatcttacaacatcagaatccacagcaactt
tcatctaacctatgggcagctgtgagggcaagaggctgtcagtttctaggaccagctatg
caggaggaggtattgaaactaattctgcttgccctggaagatggctcagccttgtcacgt
aaagtgctggtcatgtttgtggttcagcgccttgagacccactatccacaggcttctaaa
acagctataggccatgtggtgcagctactatacagagcttcctgctttgtggtgacaaag
cgagaagaggaatcatcactgatgcaattgaaggaagaatgcaggacatacgacgcctta
agacgtgaccatgactcacagatagtacagattgctatggaagcaggtctaaggatagcc
cctgaccaatggtcatcactgttgtacggtgacactactcacaaatcccatatgcagtca
atcatagataaactgcagacacctcagtccttctcacagagtgtaaacgagctggtgatt
gctctacagaggacaggtgatccatgtaacctacagagactgaggacacatctggagttt
cttgctaatatagacccctctccagaggcaccacccccatcctgggagaacctggaggca
gtaatgaaggcagtgcgcagtgtagtccaaggactagttgactttgtaaagagcaatgga
cacaaaaagttggaaaacacaactgttcataattctcgatacaaaaccagcatgtgtcga
gattttttacagaaaaacagttgtcctagatcttctaactgcacatttgctcattcccaa
gaggaacttgataaataccgatcacggaccaagaaaactggtaaagtttgtaacacacct
cctgactatgaagatttcccaactagtgacggagacagtattcaagtatcagaaaaactt
aaagatgataattttgccacaggatacggtaaccaaaggagtaaacctctgcctgatgtt
gtgacagccaaagtgctgacttctttggcaaagtcaatgtcttcactaacctttgctcag
gccaagggattgacatcagacaagatgacagaatcctcagagacaggaccacggatgagc
tctatagtagtacctggaatggcacctcttattccacccccaaataccatgcagccccca
cctgtacaagtgccgcgtagtccctaccctctagacatgtaccagggacagagaccccct
actcagaggacccatggccctggagtaccagcaggatctagaccagtatttggaggtggc
cagaatgtaatgactggcagaccaggatttcaatccatgccaaggtatatgacgggtccc
tacagaccccagtacaacaaccagcctcaaccacaaccacaagtccagtataccggtggt
gtaccttttagacagccagtagatcctggcctgacgagaatgcctttcccacaacagcaa
cagcaacaacctccaattggctttgtaaattacaactacccgcacaactccagtgccctc
aacccatacgctgagccatttcaaggtggaggatccaggccccttacaccagaggaccaa
atctaccctgttgtaggaaactacccagaaggattaaactatcaacttggaacaatgcca
cctgggcaagggcaggctaaaattctaaatgatctacatcatcgccgagcagaaatttta
aatcgactgttcaacccagctgatgatcttcttacaaatagtgagacacctacatattca
agtaatgtattaccacaatctgatgcagatgacatgcttcgtggcgatattcattctaaa
aagagcatgttccacagcagcctgggcctctatcagggcagtttgcaatcttctcagagt
gaggaacaggatttatttaagatgatgacaggacagagaagtatgattggaactctttca
gagcaaggatgtgaagggtctcctgcaggtagacatggttcagctcaagtagacaaaaaa
cgtggttcaagttggcagcgagactacaacaaaagtcagttgttaacatcctcaaaacag
ccaacaaaggagattctaggtgtggaggagtataaagtgaccaaccaaaattatagtatt
gctagttctgatttttctcatcaacaagaaatatccagctcctctaaatgggtaatggta
cagccagccaactttggagctcaccatacctctgaagaaagttgtgacatgactggctca
gcaccacattcaacattaggatcctctttttctgtccagaaatgggacaagtcacaggca
tatggtaaccgtgaccaagttcaaaacatgacaaattctactggcaagacaagtggtcat
aacaaatctgatgtttcctattggagagcaagcaataacagtaataggaacaggacattc
cacacaaagaatgacagagagatatcggagtcgtccaaccttaagccagataacatttat
gcacaccagcgccacttaattgaacatgtctccagaaatacatctactatatccaaccct
agtgataccccagctgcactggacacaggatgtgctgtgtggtcaattgatggtgttgat
gatgtcgtgtggaatttcactgacacccaggctgtatctaaccaggcaagtgaggaggag
gacctgctgaaggaggagcagataaacagcactgagtttatgttgaattggctccatgac
atcccagatgaaccaaccccaatcgaacctatggatcagttcatctttccattaagccgt
gccttggatcgtagggaagatgatgccattataccgtttgactccaccccaatggtgtct
cgttttggtcccatttcacgatctgcaaggaccaagtacaaaaatactgaacctgttcaa
gtcacagccaatgatgtaatgaaaaaggtgactcctgtgactgctgttacaccattagac
cacccaaagcccacagccaaggcccagcccagttacatgtcacctgtggtggagacatcc
aatacagccaacactgccaggtggaggaggcccagtgagttggagaactgtgtacaaaga
gagctgagtcgactagaacaacaagctctcaaggctgatacagagaatgagtttttggct
tgtgagctaaaagctgtagagttgcagatatcactgcaaactgagaaaactgtgccacaa
ccagttgcagaagctccaatcataaagcctgacattcatccagctgttgaggtagttgtc
ccagtacctgttgctgtccctgtaaagacggacagtcctcacaaccctccaggcatctgg
agcagttttgaacttctcaaggctgcatacacacgtggacagacaatggatgacttgcga
gaactgttaaagcatgtaccaatcggagtggacaaacctagtgggccactcacccaacag
gaagaacagctcctaaaggatgtctttggtggggaaatcccaagcagtgcaaacttacag
gcctga

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