Ylistrum balloti (Ballot's saucer scallop): 132551592
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Entry
132551592 CDS
T11245
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132551592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yba03021
]
132551592
Enzymes [BR:
yba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132551592
Transcription machinery [BR:
yba03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
132551592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Zn_ribbon_double
Chorismate_synt
zf-tcix
Motif
Other DBs
NCBI-GeneID:
132551592
NCBI-ProteinID:
XP_060071730
LinkDB
All DBs
Position
Unknown
AA seq
1389 aa
AA seq
DB search
MVKEQFREADVAKKISHVTFGLLNSHQMQQMSHLHVVSKTLYNQDGSRKPVPHGVLDHKM
GTSEKDNNCDTCGKGLADCTGHFGYIDLELPCFHIGYFRAIINVLQMICKECSGILLQSE
NKTHFLESIKRPLTYLQCKAMKKKIYDKCRKVSICPSCGAYNGMVKKCGLLKIIHDKYKT
GHKGNEIIRSDFLSSFQDAVEHDREIEPLLSKTQVILNPVMVLKLFQRISDEDMPLLMMN
SDIARPEDLILTRVLVPPICIRPSVLSDLKSGTNEDDITMKLTEILFLNDVIQKHKATGA
KMYMIMEDWDYLQLQVALLYNSETSGIPIHMQPKKSTRGFVQRLKGKQGRFRGNLSGKRV
DFSGRTVISPDPNMRIDQVAVPVHVAKVLTYPERVNKANIKMLRKLVKNGCDVHPGANFI
QQRNHIKRFLKYGNREKVAKELKYGDIVERHLIDGDIVLFNRQPSLHKLSIQAFYAKVMP
HRTFRFNECCCNPFNADFDGDEMNLHLPQTEEAKAEAITLMGSKANIITPRNGEPLIAAI
QDFITGAFLITQKDVFFDRARTCQLISAMLSGTDSNMEINLPPPCIIKPCKLWTGKQIFG
VLLRPNKKCPVRANLRTRGKNYSTGEDLCYNDSFVVIRNSELLCGSMDKGTLGSGSKNNI
FYVILRDYGEQYAADTLVRLARLCPAFLSNRGFSIGIGDVTPGVGLVKAKNLLLEDGYSK
CDSYIRDLDEGRLQTQPGCSEEETLEACILKELSVIRDHAGKACLRELHKSNSPLTMAIC
GSKGSFINISQMISCVGQQAISGKRTPNGFEDRALPHFEKHAKDPAARGFVENSFYTGLT
PTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSHYDLTVRSSTGDIVQFLYG
GDSLDPACMEGKDTPIDFKRVFDHVRANTRRTCHGEKSLSGQNMIQLVEQKLATDMLKTC
SAEFKNDLMDFMKKMAHSIDKTREKFGVIDQQGMQLPGVLFEMERVTETQLDHFLSCCKH
KFMRAQIEPGTAVGAVCAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINASKII
STPIITAQLEVENDAEFARVVKGRIEKTTLGEVSEYMEEVFLPDDCFMLIKLDLERIRLL
KLEVHADSIKFAICSSKLKVKPQHIQIHSEAVITVQPNETSKSSMYYVLQTLKKELPDVM
IKGIPSVTRAVIHIDDGEGDKYKLLVEGDNLRAVIATPGVKGTHVSSNNTLEVEKTLGIE
AARTTIMNEINYTMSSHGMSIDIRHVMLLADLMTFKGEVLGITRFGLAKMKESVLMLASF
EKTADHLFEAAYHGQKDTINGVSECIIMGIPMGIGTGLFKLLHKAEKNLKPRRRPLVFDR
TEFHLPMVS
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaacaattccgagaagccgacgtggctaagaaaataagccatgtgaccttt
ggattgttaaattctcatcaaatgcagcagatgtcccatttacatgttgtcagtaaaact
ctgtacaaccaagatggcagccggaaacctgttccacatggtgtacttgatcataagatg
ggcacaagtgagaaagataataactgtgatacatgtggaaaaggattggcagattgcact
ggacattttggttacattgaccttgagctgccttgcttccatattggatatttcagggca
atcatcaatgttttacagatgatatgcaaggagtgcagtggaattctgcttcaatcagag
aacaagacacacttcctggaaagcatcaaacgaccgctcacctaccttcaatgcaaggcc
atgaagaaaaagatttatgataaatgcaggaaagtgtccatttgtccatcctgtggtgca
tacaatggtatggtgaagaagtgtgggttgttgaagatcatccacgataaatacaaaact
ggacataagggcaatgaaatcatccgttccgacttcctatcatcttttcaagatgcagtg
gagcatgatagggagattgagcctcttttgagcaagactcaggttatactaaatccagtc
atggtgctgaagctgttccagagaatctctgatgaggacatgccactgctgatgatgaat
tcagatattgctcgacctgaagacctcatccttacaagagttctggtaccacctatttgt
attcggccatcagtactctctgacctcaagtctggaactaatgaagatgacatcactatg
aaactgactgaaatattgttcctgaatgacgtaattcaaaaacacaaggctacaggagca
aagatgtatatgattatggaagactgggattacctacaattacaagtggcattgctgtac
aacagtgagacatcaggcatacccatacacatgcagccgaaaaagtctacaaggggtttt
gtacagagactgaaagggaaacaaggtcgtttccgtggaaatctttcaggcaaacgagtt
gatttctccgggagaactgttatttcccccgaccccaatatgagaatagatcaggttgct
gtgcctgtacatgttgctaaagtattgacatacccagagcgtgtcaacaaagccaacata
aagatgctgcgtaaactggtgaagaatgggtgtgatgttcatccaggagccaactttata
cagcagagaaaccacattaaaagatttttaaaatatggcaatagagaaaaagtagcaaag
gaactcaaatatggtgacattgttgaacggcatctgatagatggtgatattgtactgttt
aaccgacaaccctcactacacaaactcagtatacaggctttttacgcaaaagtcatgcct
catcggacatttcgcttcaatgagtgctgttgcaaccccttcaatgctgactttgatggt
gatgaaatgaacctgcacttgccacagacagaggaagccaaggcagaagcaataactttg
atggggtctaaagctaacatcataacaccaagaaatggtgaaccattgatagctgccata
caggatttcatcacaggtgccttccttattacccaaaaagatgtgttctttgatcgggct
cggacctgccagttgatctcggcaatgttgtctgggacagacagtaacatggagattaat
ttacctccaccatgtatcatcaagccttgtaaattatggactggcaaacagatatttggt
gtgctgttacgtccaaataaaaagtgtccagtgagggcgaatcttcggacacgtgggaaa
aactactctacgggagaggatctttgttacaacgactcatttgtggtgatacgcaacagt
gaacttttgtgtgggtcaatggacaaaggaacgctgggctcaggctcaaagaacaacatc
ttctatgtgatccttagagactatggtgaacagtatgctgccgacacgttggtacgcttg
gccagactttgtccagcattcctcagtaatcgaggtttttccattggtattggtgacgta
acaccaggcgttggattggtcaaggccaagaacctacttctggaggatggatattcaaag
tgtgacagctacattcgtgacctggatgaaggaaggctacagacccagcctggttgcagt
gaggaggaaactttagaggcttgtattctgaaggagctgtctgtgatccgagaccatgct
ggaaaggcatgtctgagggagctacacaaaagtaacagtcccctgactatggctatctgt
ggttctaagggatcattcatcaacatatcacagatgatatcctgtgtaggacagcaggcc
ataagtggaaagaggacacctaatggctttgaagatcgcgctctcccacactttgaaaag
catgccaaagatccggcagcaaggggatttgtagagaacagcttctacactggtctgact
ccaacagagtttttctttcataccatggctggtcgggagggcctggtggacacagcagtc
aagacagccgagactggttacatgcagcgacgactggtaaagtcacttgaagacctgtgt
tcacactatgatctgacggttcgaagttctacaggagacatcgtccagttcttatatggt
ggggacagtcttgaccctgcatgtatggaaggcaaggacacaccaatagacttcaagcgt
gtgtttgatcatgtcagggcgaacactaggagaacttgtcatggagagaagtcactcagc
ggtcaaaacatgatccaactggtcgagcagaaattggcaacagacatgttaaagacttgt
agtgcagaattcaagaatgacctcatggactttatgaagaagatggctcatagcattgac
aagactagagaaaagtttggtgttattgatcaacaggggatgcagctgccaggagtgttg
tttgagatggagagagtgacagaaacgcaacttgaccactttctatcctgttgcaagcat
aagtttatgagagcccaaatagaaccagggacagcagttggagcggtatgtgcacagagt
attggggagccaggcacacagatgacactgaaaacgttccactttgccggtgttgcttct
atgaacatcacacagggtgtgccgaggataaaagaaatcatcaacgcctccaagatcatc
agtacgcctatcatcactgcacagctggaagtggagaatgatgctgaatttgcacgtgtt
gtgaaaggacgcattgaaaagactacattgggagaggtttcagaatatatggaagaagtc
tttttgccagatgactgcttcatgttgatcaaattggatttagaaaggatacgtctgctc
aagcttgaagtccatgctgacagtatcaagtttgccatttgtagctctaagctcaaggtg
aaacctcagcacattcagatccatagtgaggctgtcatcaccgttcagccgaacgaaaca
tccaagagctccatgtactatgttctccagacactgaaaaaggagttgccagatgtgatg
atcaagggcataccatcagtaactagagctgtgatacatatagacgacggagagggtgat
aaatacaaactattagtggagggggacaatctgcgggctgtgatagcaacccctggtgtt
aagggtactcatgtgtcctccaacaacacattggaggtagaaaaaacacttggcattgaa
gctgctcgcactaccatcatgaacgagatcaactacactatgtcaagtcacggcatgagt
atcgacatccgccatgtcatgctcttagctgaccttatgacctttaagggtgaagtttta
gggattactagatttgggttggctaagatgaaggagagcgtcctcatgctggcttcgttt
gagaagacagcagaccatttatttgaagctgcctatcatggacagaaagacacaatcaat
ggtgtgagtgaatgcattatcatgggaatcccaatgggtattggaacaggactattcaag
ctactacacaaagcagagaaaaatcttaaacctcggcggcgcccccttgtatttgacaga
acagaatttcaccttccaatggtatcctga
DBGET
integrated database retrieval system
