Ylistrum balloti (Ballot's saucer scallop): 132551769
Help
Entry
132551769 CDS
T11245
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132551769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
yba03041
]
132551769
Spliceosome [BR:
yba03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
132551769
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
PRP4
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Ge1_WD40
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
MIOS_WD40
WD_LRWD1
WD40_like
Nbas_N
Motif
Other DBs
NCBI-GeneID:
132551769
NCBI-ProteinID:
XP_060071892
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MSDDDEEPALHFQPTKPVVYGSLEEKERQRLANIKTSGSLASDAIEAGKAAGNIVINDGS
RYEISDHVDQSELLAELERRKKARHIHVSTDDAEVKASLRQLGEPICLFGEGPADRRERL
KKLLSQIGEDALKQKKKEEIELKKKKAEENITWYHEGSESLKEARYWIAQYSIPRAKKRL
AVQRQTKFIPTTQKNAKTQDIQKRVGAISNECSQIGDNRPLSFCNFSPDGKILAVSSWSG
LCKLWSIPDCGLIRQLRGHNGNVGAIVFHPQATISLDEKACCMASCGQDGSVKLWNLVSE
EPMADIEGHAPYRVSRLAYHPSGRFLGTCCFDNSWRLWDLEAQEEILHQEGHSKAVYDIA
FQRDGALSVTGGMDGFGRVWDLRTGRCIMFMEGHLKSVLGVDFSPDGYHIATGSEDNTAK
IWDLRQHKCIYTIPAHTNLVSKVKFQPEESSYLVTSSYDCTSKVWAHPTWAPLKTLAGHE
GKVMAIDISPDRKYIASVSYDRTFKLWASDNQGGL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgatgatgaagaacctgccctacactttcaaccaacaaaacctgtggtttac
ggaagcttggaagaaaaagaaaggcagcgactggctaacattaagacttcagggtcttta
gccagtgatgcaattgaagcaggaaaagcagcaggcaatattgttataaatgatgggtcc
agatatgagattagcgatcatgtagaccagtcagaattgttggcagagctagagaggagg
aagaaggctcgtcacatccatgtgtctacagatgatgcagaagtgaaggcaagtcttcgt
cagctgggagagcccatatgcctgtttggagagggcccagcagacagaagggagagacta
aagaaattactctcacaaattggtgaggatgctctcaaacaaaagaaaaaggaagaaatt
gaactgaaaaagaaaaaggcagaggaaaatattacctggtaccatgaaggttctgagagt
ttgaaggaggctcgctactggatagctcagtactctataccaagggccaaaaaaagactg
gcagttcagaggcagacaaaatttattcctactacacaaaaaaatgctaagacccaggat
atacagaaacgcgttggtgctatatccaatgaatgtagtcagattggagataatcgtccg
ctgtctttctgtaacttcagtccagatgggaagatactggcagtatcctcatggtctgga
ctttgtaagctgtggtcaatacctgactgtgggctgataagacaactcagaggacataat
ggtaacgtaggagctatagttttccatcctcaagccactatctcacttgatgaaaaagcc
tgctgtatggcttcatgtggtcaagatggatcagtaaagctgtggaatcttgttagtgag
gagccaatggcagatattgaaggccacgccccctacagagtgtcacgtctggcctatcat
ccctctggacgcttccttggaacatgctgttttgacaattcttggagactgtgggaccta
gaagctcaggaagagattcttcaccaggaggggcacagtaaagcagtgtatgacatagcc
tttcagagggatggtgctctgtctgtcactgggggaatggacggatttggacgagtttgg
gatctgcgtactgggcgctgtatcatgtttatggagggtcatttgaaaagtgtgctgggt
gttgatttctctccggatggttatcacattgcaacaggcagtgaggacaacacagctaaa
atctgggatctccgccaacacaagtgtatctataccattcccgcccacaccaacctggtc
tctaaggtcaagttccaacctgaagagtccagttacctggttacatcttcatatgactgt
acatcaaaggtctgggcccatcctacctgggcacctctgaagacactggcagggcatgag
ggtaaagtaatggcaattgacatctcacctgaccgcaagtatatagcctctgtgtcatat
gacagaacattcaaactatgggcctcagataatcagggaggactgtag
DBGET
integrated database retrieval system
