Ylistrum balloti (Ballot's saucer scallop): 132551771
Help
Entry
132551771 CDS
T11245
Name
(RefSeq) superkiller complex protein 2-like
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132551771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yba03019
]
132551771
Enzymes [BR:
yba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
132551771
Messenger RNA biogenesis [BR:
yba03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132551771
mRNA degradation factors
3'-5' decay
Ski complex
132551771
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
MTR4_beta-barrel
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
AdoHcyase_NAD
ATPase_2
Motif
Other DBs
NCBI-GeneID:
132551771
NCBI-ProteinID:
XP_060071895
LinkDB
All DBs
Position
Unknown
AA seq
1261 aa
AA seq
DB search
MRCQKSDINMGDPQTASREDTFDFDLIETGCYGSFTAVDKDKQSVKLNHAWPKKTLPVGL
PPVLPDWRADVEKYLTCPEKLPIHDTARSQKFWPRECCPENLYSVDLCPLQTTIQVERNP
TTGQLLDYKEEYLTDTGSTGKTSLSLKRAPGLPSLDVRGSTLNIPFWPGGLDEPELEKTI
ADDADLNSELNLESDLLTLAPGMKSGMTFDVPQSKNTEVTGGTDQPTPHSVINLADILAQ
DIDDLDLGETEDAEESKEPEEISEAVEIKKSESLEKLVQATDKGTEVETVKIKTVVKEEW
AVNVDIDAPVEDFYKRIPDMAYKWPFELDVFQKQAILHLENHDSVFVAAHTSAGKTVVAE
YAIALSLKHMTRTIYTSPIKALSNQKYRDFKQTFTDVGLITGDVQMNQTASCLIMTTEIL
RSMLYNGSDVIRDLEWVIFDEVHYINDADRGVVWEEVLIMLPKHVNIILLSATVPNTIEF
ADWIGRTKRKKIYVISTLKRPVPLEHFLYTGNSGKTSDQLFLLVDHKKTFLTNGYSKALE
AKKERASKSSQNFGAKGTRGAHPNQDKNIWISVIDMLKKKDKLPVVAFTFSKKKIEDNVN
NLHSLDLTTQKEKSEIHIFFHKSITRLKDPDKKLPQVMQMEDHLKRGLGMHHSGILPILK
EVVEMLFQRALVKILFATETFAMGVNMPARTVVFDSIRKHDGTAFRDLLPGEYIQMAGRA
GRRGLDTTGTVIILCKGDVPEMSDLHRMMLGKPTKLESQFRLTYSMILNLLRVEQLRVED
MIKRSFSEFHSQKDTVKHKKALEELHSEVAKITNIECFLCSVDLEKYYESCKEYHASKKQ
LQTVVLSHPTAIKLLSAGRVVTVDNASHNNVLGVVLQTNVSSSSDRVFNCLVICDEKCAK
GERQTKSADTIGQVTPVLSNTLFRPEGKCCHQLVPLKAEDISVVTTKTIRVEVDRIINDV
RKRQQPRFKDDPPSQAVSIATQELLRLTEGNPQGLPGLDPVKDLHLRDIDMVEKFRAFSL
LEGSLKTFQCVNCPRFQEHFSQLSSNMRLKDEYIRLKFLLSDESLQLLPEYQQRIEVLRA
LNYIDANNTVQLKGRVACEISSHELMITELVFENALTELHPTEIAALLSSVVFEQKKASE
PNIIDTLEKGKERILEIADRITVLQKQMGMLLAAEYKEAFKFGLMEVVFEWARGMPFAEI
TNLTDVQEGIIVRCIQRLHETLRDVRNAARIIGDPVLYQKMDEASFMIKRDIVFAASLYT
Q
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgagatgtcagaaaagtgatataaacatgggtgacccacagactgccagcagagaagat
acgtttgactttgaccttattgagactggttgttatggcagttttacagcagttgacaaa
gataagcagtcagttaaattgaaccatgcttggcctaaaaaaacgttaccagtgggatta
cccccagtgctgcctgactggagagctgatgtggagaagtacctcacttgtccagagaaa
cttcctatacatgacacagcgagatctcaaaaattctggcctagagagtgctgtccagag
aacttatactcggtcgacttatgtccactccagacgaccatccaggtagagagaaatccc
accactggtcagctgctggactataaagaggaatacttgacagacacaggaagtacaggc
aagacctccctgtcactgaagcgtgcaccaggtcttccatcactggacgtccgcggcagc
acccttaatattccattctggcctggaggacttgatgaacctgagttagaaaagacaatt
gcagatgatgctgatttaaactcggagctaaatcttgaatcagatctcctgactttagca
ccgggaatgaaatctggaatgacctttgacgttccccaatctaagaatacagaggtcaca
ggtggtactgatcaacccacaccccattctgtcattaacctcgcagatatcctggcccag
gatatagatgaccttgaccttggagagactgaggatgctgaagaatcaaaagaaccagag
gagatatcagaggctgttgaaattaagaaaagtgaaagtctagaaaaattagtacaggcc
actgataaaggcacagaagtagagacagtcaaaatcaaaactgtagtgaaggaggaatgg
gcagtcaatgtagatattgatgctccagtggaagatttctacaaacgcattccggacatg
gcatataaatggccatttgagctggacgtattccagaagcaggctattctccacctggaa
aaccatgacagcgtgtttgtggccgcccacacttctgcagggaagactgtggtggcagag
tatgccattgctctgtccctaaaacacatgaccaggacaatttatacctcgcctattaaa
gccttatccaatcagaagtaccgagactttaaacagacgttcacagatgttggactcatt
accggagatgttcagatgaatcagacagcatcgtgtcttatcatgaccactgaaattctc
aggtcaatgttgtacaatggatcggatgttatccgagaccttgagtgggtgatatttgat
gaggtccattacattaatgatgctgatcgaggtgttgtctgggaagaagtccttattatg
cttccaaaacatgtcaacatcattcttctgagtgctacagttcccaacaccatagagttt
gcagactggatagggagaacaaagaggaagaagatttatgtaatcagtacccttaagcgt
cctgtccccttagaacattttctgtacactggtaacagtggtaaaaccagtgaccagctc
ttcctactggtggaccacaaaaaaacctttcttacaaatggatatagcaaagccttagaa
gctaaaaaggaaagggcaagcaaaagttcacaaaattttggagccaaaggaacgagaggt
gctcatcctaaccaggataagaatatttggatctcggtgattgacatgttaaagaagaaa
gataagctaccagttgttgccttcacattttccaagaaaaagattgaggataatgtgaac
aatcttcacagtcttgatctcactacccagaaggagaaaagtgagatccacatttttttc
cacaagtctatcacacggttaaaggatccagataagaagctgccacaggtgatgcaaatg
gaggaccacctgaagcgtggtctgggtatgcaccacagtgggatacttcccatccttaag
gaggtggtagagatgctcttccagcgagcactagtaaagatcttatttgctacggagaca
tttgccatgggtgtaaacatgccagcccgtactgtggtgtttgactcaatcagaaagcat
gatgggacagcatttcgtgaccttttgcccggtgagtacatccaaatggcagggagagca
ggacgtcgaggcttggatacaacagggacagtgataattctctgtaaaggggatgtccca
gaaatgtctgatcttcataggatgatgctggggaagccaaccaaattagaatcccagttc
cgtctgacctattccatgatcctcaacttgttacgagttgagcagcttcgagtagaagac
atgatcaaacgcagcttctcggaattccactcacaaaaggacactgtcaaacataagaag
gcacttgaagaactccactctgaggtggctaaaatcacaaatattgaatgtttcctgtgt
tctgtagatctggagaagtattatgagagctgtaaggaatatcacgcatccaagaaacaa
ttacagactgttgtcctgtcacatccaacagcgatcaagttactgagtgcagggcgagtg
gtgactgttgacaatgctagtcataataatgttctcggtgtagtgttacagactaatgta
tcctctagtagtgaccgagtcttcaactgtcttgtcatttgtgatgaaaaatgtgcaaaa
ggtgaaagacagacaaaatctgctgatacaattggtcaagtgacacctgtattaagcaat
accctgtttaggcctgagggtaagtgttgtcatcagctggtacccctgaaggcagaggat
atcagtgtggtcacaacaaagacaatacgagtggaggtggatagaattatcaatgatgtt
cgcaagaggcagcaaccacgatttaaagatgatcctccaagtcaggcagtatccatagca
acacaagagttgttaagattaacagagggaaatccacagggattgcctggccttgatcca
gtgaaagaccttcatcttcgtgatatagatatggtggaaaagtttagagcattttccctc
ctggaaggaagcctgaagacattccagtgtgtcaactgtcctagatttcaggaacatttt
agtcagctaagcagtaatatgagattgaaggatgaatatatacgactcaaatttctgttg
tctgatgaaagtcttcagcttctgccggagtaccagcaaagaattgaggttctgagagct
ctgaattacattgatgccaacaacacagtgcagttgaagggacgggtggcgtgcgagatc
agcagccacgaacttatgattactgaacttgtatttgagaacgctctcacagaactccac
cccactgagatagcagccttattatcctcagttgtgtttgaacaaaagaaagccagtgag
cctaacataattgacactctagaaaagggcaaggagcgtatattggagatagctgacagg
atcactgtcctacagaaacagatggggatgctattagcagcagaatacaaggaagcattc
aagtttggacttatggaggttgtgtttgagtgggcgagaggcatgccatttgcagaaata
acaaacttgacggacgtccaagaaggtattattgtgagatgtattcagcgcctacatgag
acactgagagatgtgaggaatgcagctagaatcatcggagaccctgtcctctatcagaaa
atggacgaggcctccttcatgatcaaaagggacatcgtttttgctgcatcattatataca
cagtga
DBGET
integrated database retrieval system
