Ylistrum balloti (Ballot's saucer scallop): 132552569
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Entry
132552569 CDS
T11245
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03082
ATP-dependent chromatin remodeling
yba03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132552569
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132552569
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
yba01009
]
132552569
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yba03021
]
132552569
03036 Chromosome and associated proteins [BR:
yba03036
]
132552569
Protein phosphatases and associated proteins [BR:
yba01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132552569
Transcription machinery [BR:
yba03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132552569
SWI/SNF complex
132552569
Chromosome and associated proteins [BR:
yba03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132552569
PBAF complex
132552569
SWI/SNF complex
132552569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
132552569
NCBI-ProteinID:
XP_060072731
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MAMVGTKTFGDMPNKFQIEEGGEYYYVGSEVGNYLRMFRGSLYKKYPSMWRRLLTVEERK
RVATLGTGAPALATNITLLKAVEVDNILEGNDDQYKAVSISSDTSYTRDSKAKRNTWVTT
VPSSSHHLDAVPCSTSINRNRLGKSKVRTFPLCFDDTDSPPNHENANLSEQLVPIRLDME
YEGQKLRDCFTWNKNESLITPEQFAEIMCDDLDLNPINFVPAVSQAIRQQIEAFPTDNLL
DQQADQRVILKLNIHVGNISLVDQFEWDMSEPENSPEEFSMKLCAELGLGGEFVTSIAYS
IRGQLSWHQRTYAFSSEAPLPTVEVAIRNQNEADQWCPFLETLTDAEMEKKIRDQDRNTR
RMRRLANTAPSW
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggttggaacaaagacgttcggcgatatgccgaacaaattccagatcgaagaa
ggaggagagtattactatgttggttctgaagtaggaaattacctgcgtatgttcaggggc
tcactgtataagaagtatccctctatgtggagacgcctactcactgttgaagagcggaaa
agagtcgcaactttaggtactggagcgcctgctcttgccacgaatatcacccttctgaag
gctgttgaggtagataacatcttagaaggcaatgatgaccagtataaagctgtgtccatc
agcagtgatacctcttacacaagagactccaaagctaagaggaacacttgggtgacgaca
gtaccaagtagttctcatcaccttgatgctgtgccctgttctacctccatcaacaggaac
cgacttggcaagtcaaaagtccgcacatttcctctctgttttgacgatacagattctcca
ccgaatcacgagaatgccaatctgtctgagcaacttgtaccaatacggctagatatggag
tatgaaggacagaaactccgagattgctttacatggaacaagaatgaatccctcatcaca
cctgaacagtttgctgagataatgtgtgatgatttggatctcaaccctataaactttgta
ccggccgtgtctcaggcaattcgtcagcagattgaagccttccctacagataatctatta
gatcaacaagctgaccagcgtgtcatactgaagctgaacatacatgttggaaatatatct
ctagtggaccaatttgagtgggacatgtcagagccggaaaactcccctgaagagttctct
atgaaactctgtgctgagcttggtttgggaggcgagtttgtgacctctatagcgtacagt
atcagaggacagctcagctggcaccaaaggacatacgcctttagcagtgaagccccactg
cctactgtagaggttgccatccgaaatcaaaacgaggctgaccagtggtgtccattccta
gagaccctgactgatgctgaaatggaaaagaaaataagggaccaggacagaaacacaaga
cgtatgagacgattagccaatacagcaccatcgtggtag
DBGET
integrated database retrieval system
