Ylistrum balloti (Ballot's saucer scallop): 132552976
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Entry
132552976 CDS
T11245
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5 isoform X1
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03018
RNA degradation
yba03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132552976
09123 Folding, sorting and degradation
03018 RNA degradation
132552976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yba03019
]
132552976
03041 Spliceosome [BR:
yba03041
]
132552976
Messenger RNA biogenesis [BR:
yba03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132552976
mRNA degradation factors
5'-3' decay
Lsm complex
132552976
Spliceosome [BR:
yba03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
132552976
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
EDC3_N
Motif
Other DBs
NCBI-GeneID:
132552976
NCBI-ProteinID:
XP_060073160
LinkDB
All DBs
Position
Unknown
AA seq
90 aa
AA seq
DB search
MTTTFSNPSQLLPLELVDKCIGSRIHIIMKNDKEIVGILLGFDDYVNMVLEDVTEFESTP
EGRRVTKLDQILLNGNNITMLVPGGEGPEM
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacgttttccaacccatcgcaacttctaccgctagaattggtggataaatgt
attggctcaaggatacacataatcatgaaaaatgacaaagaaattgttggaatcctgcta
ggtttcgatgactacgtcaatatggtgctggaagatgtcacagaatttgagagcacaccg
gagggtcgaagagtgaccaaactggaccagatattactcaacggtaacaatatcactatg
ctggttcctggtggagaaggaccagaaatgtag
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integrated database retrieval system
