Ylistrum balloti (Ballot's saucer scallop): 132553609
Help
Entry
132553609 CDS
T11245
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03015
mRNA surveillance pathway
yba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132553609
09123 Folding, sorting and degradation
03018 RNA degradation
132553609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yba03019
]
132553609
03041 Spliceosome [BR:
yba03041
]
132553609
Messenger RNA biogenesis [BR:
yba03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132553609
mRNA cycle factors
Stress granule specific factors
132553609
Spliceosome [BR:
yba03041
]
Complex C
Other components
Complex C specific factors
132553609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RRM_Nup35
RRM_occluded
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
132553609
NCBI-ProteinID:
XP_060073847
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MAMNPAGPSYPMASLYVGDLQADITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVN
FQQPADAERALDTMNFDTIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDT
FSAFGNILSCKIVTDENGSRGYGFVHFETEEAARNAIDKVNGMLLNGKKVFVGKFMNRRE
RLEQLGDKMKRFNNVYVKNFGDELDDDKLRDMFEPYGKIISAKVMSEEGPNMKPRGFGFV
SYEDPESAEKAVEELNGLDINGKTLYAGRAQKKAERQAELKDKFEKIRMERINRYQGVNL
YVKNLDDNIDDERLRKEFSQFGTITSARVMSEQGRTKGFGFVCFSSPEEATKAVTEMNGR
IVVAKPLYVALAQRKEDRKAHLASQYMQRIASMRMQGQQMGQMGQMSQMFQPGGGAGYFV
PQMPQTQRSFFAPQQMQQMRASPRWQTVRQPNPAGGFQTMPAGPQMRQSRPTGQATVRSN
LNARPITGQTGAPQQRMTMNQQPMPGRAPPNVGAPNVQTPANRGAYKFTTQMRNPPQAVQ
SNQPMQQQPQQAVLVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQRMYPELAGKITGM
LLEIDNSELLHMLESHESLEAKVKEAVAVLQAHQAKETSGGKPGSD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgaatccagcaggtccaagctacccaatggcgtccctttatgtgggtgatctt
caagcagacatcactgaagctatgttattcgagaaattctcgacggcaggaccagtattg
agcattcgtgtttgtcgagacatgataaccagacgatcgcttggttatgcatacgttaac
tttcaacaaccagcagatgctgagagagcacttgacaccatgaactttgacaccatcaag
ggtagaccaatcagaatcatgtggtcccagagagatccctccttaagaaaatcaggtgtt
ggcaatgtattcatcaagaatctggacaaaagtattgacaacaaagctctgtatgatact
ttctctgcctttggaaacatcttgtcttgtaagatagtgacggatgaaaatggttcccgt
ggttatggatttgtacattttgagaccgaggaagcagccagaaatgctattgacaaagtg
aatggcatgttgctcaatggcaagaaagtatttgtgggaaaatttatgaaccgtcgtgag
cgactggagcaacttggtgacaagatgaagcgattcaacaatgtttatgtcaagaatttt
ggagatgaacttgatgatgataagctgcgtgatatgtttgagccatatggaaagatcata
agtgcaaaggtgatgagtgaggaaggtcctaacatgaagccaaggggattcggcttcgtc
agttatgaggatccagagtctgctgagaaggctgttgaagaactaaatggcttggacatc
aatggtaagacactgtatgcaggtcgtgcccagaaaaaggcagaaagacaggctgaactc
aaagataagtttgagaaaatccgtatggaaagaatcaatcgataccagggtgtcaacctc
tatgtcaagaacttggatgacaacattgatgatgagcgtcttcgcaaggagttttcacag
tttggtaccatcacaagtgccagggtgatgtcagaacaaggccgcaccaagggcttcggc
tttgtgtgttttagctctccagaagaagccaccaaggcagtaacagaaatgaatggacgt
attgtggtggctaagcctctttatgtggctctcgcccagcgaaaggaggacaggaaggcc
catctggcgtcccagtatatgcagcgcattgcaagcatgaggatgcagggtcagcaaatg
ggacagatgggccagatgagtcagatgttccagccaggtggaggtgctggttactttgta
ccacagatgccacagacccagagaagcttctttgctccccagcagatgcaacagatgcgt
gccagtccaaggtggcagactgtccgccaaccaaatcctgctggaggcttccagaccatg
ccagctggaccccaaatgcgtcaatcacgtcccacaggccaggcaactgtgcgcagcaac
ctaaatgctcgtccaatcacaggacagactggtgcaccacagcaaaggatgaccatgaac
caacagccaatgcctggccgtgcaccaccaaatgtaggggcaccaaatgtccagacaccg
gccaacagaggtgcttacaaattcaccactcagatgcgcaatcctccacaagcagtccag
tctaaccagcccatgcaacagcaaccccagcaggctgtgcttgtacagggccaggaacct
ctgacagcatccatgttggcagctgccccaccccaggaacagaaacagatgctgggagaa
cgtcttttcccactcatccagagaatgtatcccgaactggcaggcaagataacaggaatg
ttgctggaaatcgacaactccgaattgcttcacatgttggagtctcacgaatccctcgag
gctaaggtgaaggaagctgttgctgtactgcaggctcaccaggccaaggagacatctggc
ggcaaaccaggctctgactag
DBGET
integrated database retrieval system
