Ylistrum balloti (Ballot's saucer scallop): 132555600
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Entry
132555600 CDS
T11245
Name
(RefSeq) ribonuclease 3-like
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132555600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yba03019
]
132555600
03009 Ribosome biogenesis [BR:
yba03009
]
132555600
03036 Chromosome and associated proteins [BR:
yba03036
]
132555600
Enzymes [BR:
yba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
132555600
Messenger RNA biogenesis [BR:
yba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
132555600
Ribosome biogenesis [BR:
yba03009
]
Eukaryotic type
90S particles
RNase
132555600
Prokaryotic type
rRNA processing factors
132555600
Chromosome and associated proteins [BR:
yba03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
132555600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
RM44_endonuclase
dsrm
LTI65_LTI78_N
Motif
Other DBs
NCBI-GeneID:
132555600
NCBI-ProteinID:
XP_060075933
LinkDB
All DBs
Position
Unknown
AA seq
1448 aa
AA seq
DB search
MDLRGNPRLMGPMRFPCGMGNNISPRMPQQQGMFPNGSPFLQNQSPNHPVLAQMSPSLRL
PMGCQPPGPTPPTMRLFNHLGNVPISVPGQMQPLWGSGALSGMQRPNPMAARGQMISGNM
NLGNVPSLNLMGATQNAPSQQDQLAFSPTAINLQVQQQGNMGFMNGGQMRSPVFQNMNQT
SVGMLGNMGPNQNQLNQNCQNMDSRGQDRRNNQSSFRSQSHRDRGRGQRDRDRGQDDGRS
QGSTSRRNRDSERSQHSDGKDHDRLSGKGMSGDRGGDRGGDRGGDRGGDRGGDRGGDRGG
ERQGDIRPRDRDSGDSRKSRRESCGRSDSRRRDNSRPRQSPKDDNSRKNYSRGYGARRDD
SRGNIRRGSNSRCSSRRRDNFSESPRKGGQRENRPRQNRDSGDETRGNKRRNDEESYSSG
SKRKRTSSPKSSSKLEEEPPSDGDIETESQDQFETVDPKDMSPPAWIRCSPADLYFARNS
ESGCMESTKRMTDLEDKFDLDLLQRAKLIKEAQPVIEVPPPVMHGHTHHHDHSDSDSSSS
SSSSDSDDNEDEDNKWMEELNRKKNHPYRLHEELWYNDPGEMNDGPVCRCSLKSRRTGIR
HDKYPGEESYDLCNSVSNNKNVLYHYVITMSPPTNFLTRSPTIIEHDNHEYIFEGFSLFS
HYKLENIPVCKVIRFNINYTIHFFEETVPENFTIRSLDLFSQFLFTEILELVDLDWKGPG
GEDSCPRFHLMPRFARSLPENGKEILSMNEVLLYLLRCSKPLLEETELAQMLKADQHEWQ
NFLDEIRGMVVTYPGMKPSSLRIDQLDRQQSETDVITYPLIIHFGIRPAQLSYAGDPYYQ
KTWKQYVKFKHLLNSKPKVTFSDKQKLEQKESYLQELRTKSTMKREVTVEISSEGFLRTG
IKSDITQHAMLIPVLLGHLRFHQCLSVLEKTLDYKFKDRSLLQLALTHTSYKVNYGTNPD
HARNSLSNCGRRQLEYGDRKIHYAHTRKRGINILLNIMSRMGNKEELSSEIPHNERLEFL
GDAVVEFITSVHLFYMFPWLEEGGLTTYRAAIVQNQQLAVLAKKLTLQNFMLYAHGPDLC
HESDLKHAMANCFEALMGALFIDNGIELAGRIFCQTLFDDDRLVKTWRELALHPLQEEEP
NGDRQWVESSPALQKLLNFEEATGITFNHIRLLAMRSAFTLRSVDYNNLTLGHNQRLEFL
GDTVLQLVASQYLFRHFPDHHEGHLSLLRSSLVNNRTQSIVCDDLNMSEYAIFAETRGDK
LDMKTKEKADLLEAFIGALFVDKGIDHCKVFCNVCFFPRLKDFIMNQDWNDPKSQLQQCC
LTLRELDGGEPDIPLYKMIEAFGPTNTREYTVAVYFRDERLAKGMGHSIQQAEMAAARNA
LKERSELFPILAHQKRFLEKKQRKRKHGRRQRVGERNGGERGAGSSSGYSQSPNKSADNR
RRPGRRGR
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggatctccgtggaaacccaagattaatgggaccgatgcgatttccatgtggaatggga
aacaacatttctccccggatgccacaacaacagggcatgtttccaaatgggagtccattt
ctacagaatcaatcaccaaaccatccagtattggcacagatgtcgcccagtcttcgactt
ccaatgggatgtcaacccccgggaccaactccccctactatgaggttattcaatcatcta
ggcaacgtcccaatctctgttcctggtcagatgcagccactgtgggggtcaggggcctta
tcaggaatgcaacgtcccaatccaatggctgctcgaggacaaatgatttcaggaaatatg
aatcttggaaatgttccatctctaaacttgatgggtgcaacacaaaatgcaccttcccaa
caggaccagctggcatttagtccaacagctattaatttacaggtgcaacagcaaggtaac
atgggctttatgaatggaggacagatgaggtctcctgtttttcaaaacatgaatcagaca
tctgtgggcatgcttggtaacatgggtcccaaccagaaccagctcaaccaaaactgtcag
aatatggacagtagagggcaagataggagaaacaaccagtcttcatttaggtcccaaagc
catagggacagaggcagaggacagagagatcgcgacagaggtcaagatgatggtagaagt
cagggatctacctctagacgtaacagagatagcgaaagatcacagcattctgatggcaag
gatcatgatcgattaagtggaaaaggcatgtcgggtgacagaggaggagacagaggaggg
gacagaggaggggacaggggaggggatagaggaggggacagaggaggggacagaggagga
gaaagacaaggagatatacgtcctcgagatagagattctggagattccaggaaatccaga
cgggagtcttgtggcaggtcagattccagaaggagggataactctagacctagacagagt
ccgaaagacgataattcacgtaaaaattactcaagaggatatggtgccagaagagacgat
tcaagaggaaatatacgaagaggcagcaactctagatgtagcagcagaagaagagataat
ttcagtgaaagtcctagaaagggaggacagcgtgaaaacagaccacgtcagaaccgtgac
agtggagatgaaacgagaggaaacaagagacgaaatgatgaggaatcttacagcagtgga
tcaaaaaggaaacggacatcaagtccaaaatcctcatcaaagctggaggaagagccgcct
tcagatggggacattgagacagagagtcaggaccagtttgagactgtggatcccaaagac
atgtccccacctgcctggataagatgctctccggctgatctctactttgccaggaactca
gagtcagggtgtatggaaagtacaaagagaatgactgacctagaggacaagtttgatctg
gacctgcttcagagagccaagttaatcaaggaagctcagccagtaatagaggtccctcca
ccagtcatgcatggccacacccatcaccatgatcactcagactcagacagcagtagcagc
agcagcagctctgattctgatgacaatgaagatgaggacaacaagtggatggaggagcta
aacaggaaaaagaatcacccgtatagactgcatgaggaactctggtacaatgacccaggg
gagatgaatgatggtcctgtctgtcgctgtagtttgaaatccagaaggactggaatacgt
catgacaaatatccaggagaggaatcatatgatttatgtaactctgtatctaacaataaa
aatgtgctgtaccactacgtcatcacaatgtccccgcccacaaactttctgacccgtagc
cccaccattattgaacatgacaatcacgaatatatttttgaagggttttcattattttct
cactataaacttgaaaatatacctgtgtgtaaagtgatccggttcaacattaactacaca
atccatttctttgaggaaacagttccagagaactttaccatccggagccttgatctgttc
tcccagtttctgttcacggaaattctagaactagtggatcttgactggaaaggtcctgga
ggggaagattcatgtccacgctttcacttaatgccaagatttgctcgtagtctgccagaa
aatggtaaagaaatcctatcaatgaatgaagtgttgttgtatttgctgcgatgctctaaa
ccattgttggaggagacagaacttgcacagatgttaaaagctgaccagcatgaatggcag
aatttcctggatgaaatacgtggaatggtggtcacatatcctggaatgaagccaagttcc
ctaaggattgaccagctagatcgacaacaatctgaaacagacgtcattacttatcctctc
atcatccactttggtatccgccctgcccagctgagttacgctggggatccttactaccag
aagacttggaaacagtatgtgaagtttaaacacctcctgaacagtaaacccaaggtgacc
ttctcagacaaacagaaactagaacagaaagagagttatttacaggagctccgcacgaag
agtaccatgaagagggaggttacagtggagatcagtagtgaaggtttcctgaggacagga
atcaagtctgatataactcagcatgccatgttgattccagtactgctaggacatcttcgg
ttccatcaatgtctgtctgtgctggagaaaacacttgattacaaattcaaagacagatca
ttgttacagttggctttaacccacacctcatacaaagttaattacggcaccaatcctgac
catgcccgtaactccctgtcaaattgtgggaggaggcagctggagtatggtgatcgaaag
atccattacgctcacacacgtaaacgtggtataaacatcctgttgaacatcatgtcacga
atgggtaacaaggaggagttgtcctcagagatcccgcacaacgaacgacttgagttcctc
ggagatgctgttgtggagtttatcactagtgtccacttattctatatgtttccctggctg
gaggagggtggactgaccacttatagagcagccattgtccagaatcaacagctggctgta
ctggcaaagaaactcacccttcagaacttcatgctgtatgcccatggtccagacctgtgt
catgagtcggacctcaaacatgccatggctaactgttttgaagcccttatgggtgccctg
ttcatagacaatggtatagagctagcaggacgtattttctgtcaaacattgtttgatgat
gaccgccttgtgaagacatggagagaattggcccttcatccgctccaggaggaggagcct
aatggcgacagacagtgggtggaatcaagccctgccttacagaaattattgaattttgaa
gaagcaacggggattacatttaaccatatacgtttgctggccatgaggagtgctttcacc
ttgaggagtgttgactataataaccttacattgggtcataaccagaggcttgagttccta
ggagatacagtgttacagcttgtggcatcacagtacttattccgtcactttcctgaccat
cacgagggccatctgtctttgttgcggagttccttggtaaataacaggacacaatccatc
gtatgtgatgacctcaatatgtccgaatacgcaatttttgcggaaacaagaggagataag
cttgatatgaaaacaaaagaaaaggctgatcttcttgaagcattcattggagcgttgttt
gtggacaaaggtattgatcactgcaaagtcttctgcaatgtctgtttcttcccacgactc
aaggactttatcatgaaccaggactggaatgatccaaagtcccaacttcaacaatgctgt
ctcactcttcgagaactggatggaggcgagccagacattcctttatacaagatgatagag
gcattcggaccaactaacactcgggagtatactgtggctgtgtatttccgagacgagaga
ttagctaaggggatgggccacagtattcagcaggcggaaatggctgcagccaggaatgca
ctgaaagaaagatcagaattattccctatcctcgcacaccaaaagagattcttggagaag
aaacagaggaagagaaagcatggtcgcagacaaagggtaggagagcggaatggaggtgaa
agaggggctggatcttcctcagggtacagccaatctcccaacaaatcagctgacaacagg
cggcggcccggcaggcgtggacggtga
DBGET
integrated database retrieval system
