Ylistrum balloti (Ballot's saucer scallop): 132556284
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Entry
132556284 CDS
T11245
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132556284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yba03019
]
132556284
Messenger RNA biogenesis [BR:
yba03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132556284
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
132556284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
PI3K_P85_iSH2
EspB_PPE
DUF948
GapR_DNA-bd
Prefoldin_2
Motif
Other DBs
NCBI-GeneID:
132556284
NCBI-ProteinID:
XP_060076648
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MADRRKLQGEIDRCLKKVGEGVETFEDIWNKISLQVHNAANTNQKEKYEADLKREIKKLQ
RLRDQIKTWCASSDIKDKRILVENRKLIETQMERFKIVERETKTKAYSKEGLGAAAKMDP
IAKEKGEVVNWLSTTIETLQKQLEQFESRIEQLSSKKKKMDKDTQDQYEELRAAQDRHKF
HIKKLETIMRMVDNDALPLDQIKKIKDDVEYYLEYNQEPDFEENEFLYDDLDLDDLGSQV
LASSPPNDDSILDKLSSTPTSTNSSSPSPSPSLSMNHSKDKYEEMERKRHKSQNEDKQKA
TIIVTSSMSSPSSTNSSSSSSVTVNKVPTTPTKMFPGNSIANAESNHRPSSTPPLTAYNV
AAAGSQQNNSAETKNQAPLDHINSTISSVPVTSNSTITNSVSSTGNPVLPAVPIPMISNS
VMSSSPNTIVSNSATSSSLMTSFQPNSVSVKPEMQVVMNGPLSAVGPLLKGVTDNDIESM
SSLKSIAQQAVLEAGLENKIPTTHTTTTLDARVHAPFNNSTSTSSQVVAPQPTSPSPSSS
SDQSQQAQTTTIHLNPLLGVAPLGPVPLTREHFYQLTMLEAAHHHFPHPSDSERIRHYLP
RNPCPTPSYYPQLSPPHTDSVDYFQRLSTESLFFIFYYMEGTKAQYLAAKALKKQSWRFH
TKYMMWFQRHEEPKTITEDFEQGTYIYFDYEKWAQRKKEGFTFEYRYLEDRDLN
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggctgataggcgaaagctacaaggagaaattgacagatgtctgaagaaagtaggggaa
ggtgttgaaacttttgaagacatctggaacaagatatccttgcaggttcataatgctgcg
aacacaaatcaaaaggaaaaatatgaagctgatcttaagagagagattaaaaagcttcag
cggttgcgggaccagattaaaacatggtgtgccagtagtgacatcaaagataaacgaata
ctggtggaaaacaggaagttgattgaaactcaaatggagaggttcaaaattgttgaaaga
gaaacaaaaacaaaagcttattcaaaggaaggcttaggggctgctgcaaaaatggatcct
atcgcaaaagaaaagggtgaagttgtaaactggctttcgacaacaattgagaccttacaa
aaacaacttgagcagtttgaaagtcgaatagagcagctgtcatcaaaaaagaaaaaaatg
gataaagatacacaagatcaatatgaagaactgcgagctgcacaagatcgacacaagttc
cacataaagaaactagaaacaatcatgaggatggtagataatgacgcactacctttagac
caaatcaagaagatcaaagatgacgtggagtactatctggagtacaaccaggaaccagat
tttgaggagaatgaatttctttatgatgatttggatcttgatgatctaggttcacaagtg
ctggcttcttcaccacccaatgatgatagcatattggataaattatcaagtacgccaaca
tcaactaactccagttctccttcacctagtcctagtctttcgatgaatcattccaaggac
aagtatgaagagatggagaggaaaaggcacaaatcccaaaatgaagataaacaaaaagca
acaataatagtaacatcgtccatgtcatcaccctcatcaacaaactcatcctcatcatca
agtgtaactgtcaacaaagtacctacaactcctacaaagatgtttccagggaattcaatt
gcaaatgcagagagcaatcatcgtccaagttcaacaccaccattgacagcatacaatgtt
gcagcagcagggtcccagcaaaacaatagtgcagaaacaaagaatcaagcccctcttgac
catattaattctacaataagtagcgtgccagtgacatcaaactcaactataacgaactct
gtctcttcaactggaaatcctgtcttaccagcagtaccgatccctatgatatcaaacagt
gtaatgtcatcttcgcctaacacgattgtgtcaaacagtgcaacaagtagttccttaatg
acttcttttcaaccaaactcagtgtctgtcaaacctgagatgcaagttgtaatgaatggt
ccactaagtgctgttggaccattactaaaaggtgttacagacaatgatattgagtctatg
tcttcattaaaatcgatagcgcaacaggctgtgttagaagcgggtctagaaaacaagatt
ccaacaacgcacacaacaacaacattagatgcaagagtacatgcaccattcaacaattca
acatctacatcatctcaggtggtagcacctcagcccacctccccatcaccatcatcctct
tcagaccagtcacagcaagcacagaccacgacaatacacctcaatcctctgttgggcgtg
gcaccccttggcccagtgccactcactagggaacacttctaccaattaacgatgttagaa
gcagcacatcaccactttccacacccgtcagactccgaaagaatcaggcattacttacca
cgtaacccatgcccgactccttcatattacccacaactctctccaccacatacagactct
gtggactattttcaacgattatcaacagaatcattattctttattttctactatatggag
ggtacaaaggctcaatatctggcagcaaaagctcttaaaaagcagtcatggcggtttcat
acaaaatatatgatgtggtttcagcgacacgaagaaccaaagacaattacagaagacttt
gaacagggcacatatatctactttgattacgagaaatgggcccagagaaaaaaagaagga
tttacctttgaataccggtatttggaggatcgagatttgaactaa
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