Ylistrum balloti (Ballot's saucer scallop): 132556944
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Entry
132556944 CDS
T11245
Name
(RefSeq) nuclear pore complex protein Nup153-like isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03013
Nucleocytoplasmic transport
yba03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132556944
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132556944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yba03019
]
132556944
Messenger RNA biogenesis [BR:
yba03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132556944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
132556944
NCBI-ProteinID:
XP_060077391
LinkDB
All DBs
Position
Unknown
AA seq
1430 aa
AA seq
DB search
MSEEGGGKIKNKKVLNPPKPYERRKSFLGKVTDTVKELISPSWLSDLVNSVKKPSPQRGD
ELSTPPVQEPQYMSSLPSQQRNRIPSRDSSQYCPPKFVPLTRNGLANLSPRSSLPLVPSL
PLQQPPQQSQPPMTFCTQKSDNGEGLRKNQTQPSIFLQDTKSVDRNRNFLSNCTIGRGQL
DSDISSGPSDDIARPGPSNTETNPADISSICNHNESEESEEQEETLPASVNRLNKSTTWT
EGFTARKSKPSSYSKPGFDISLFGAPLHSNSLLGESSHESSFYPGKTTYGGASAQRKTRL
NVTGPYQSPFPMRQKMKVKPVNTSRSAATSSTAQKILETLEKMSTPLSEAKKIPTDDTVL
RLNSSFNPTSYKPARHSIGSYLNTRRELQKSQSGPPTGKVSTPVPASISRNYQRVTVPQT
QSDKGFLNAKVPTKISRPTPQEPEKTPSIASGGGKLKSKKFQQHFPGRKAAEEEEEEVEM
PNLRTEFTLPVIGTPQFDFGTSQLTKPVEKKAEKSNAEFTFATPIQKTPTKQSDQVPPTK
TDFTFSSPLNMENESNLKPKSVTFDIGPVKDKESPAAFSSPAFKFGSPMGLQSKSPSNLG
ASPVLPRSSGGLVPATELKSGSVMDVLGKSGESGFSFGSTKTNKDTTSMGGFKPASELKQ
GSVMDVLGGSSAKTSSFNSSFEPAKELKKGSVTDVLGKSSKEDSKPSLSAMFKVAEGSWE
CDSCCINNTADIIKCVACGAKKPDAAGSASPSSQPNLSSVFKVAEGSWTYDSSMIQNKST
DTKCVPCQANKPGSAGSANSPVKESSTAKFEKPTGNWECDTCLVPNDGTASKCIACETPR
PGLQLKPSVSGGLKFGGVPVSKSTGSVDQGGFKFGDASKDSSTDSKPVSSFGAGQLSFGI
PPVSSSNSTSEPSKSSTNVTEGFKFGSGEVSSGGPSVGGFKFGTGASAPNITPTTGFKIN
SIVVSKSDTVSGGFQMPSVKSSPVGDQSQNKSESSSTFKSLFGIDKSEITSGPKTDSTSG
KVSNGSLSTPATGSSAGGFQFGAPTKPPTTFSAGPDFTMAKSSEETHKPAPLFNVQPPAS
TVAAPSLKRSHNEENGPSDTKRTPFMFNAGSTAEPAKSLGNNILFGAPASAPTPATKASI
FQTPTAPTSSMSTAVSTAPAGGFNFGMGGNSAPSGGLGNSSFGTTAKNPSGFNFNVDSNK
SAVFNFVGGSSTAATTAPVFGASSINTDVKTSAPSAPFSFTAQPSAPEASQGLPTPFGSA
QDSTPAPAFAANTSGFGTGSNMFSSSSSTPSFGANGAVPPSGFGAAAAGFNNTSTGNAPA
FGAAATTSNTAPTGSFSFGNPQQSFNFGGQSNTPVNNGVFQFGAKPGEGTPAAAAPQTNA
GFNFNASSSFNFGQSTQPAMQGGNASFNIGSNNDASSGRKIKRAVRKIRR
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggagggtggtggcaagataaaaaacaagaaagttttgaatccaccgaaacca
tacgaacggcggaaatcattccttggaaaagttacagacactgttaaagaattgatttcg
ccatcttggctatcagacttggtgaatagtgtgaaaaaaccaagcccacagcgaggagat
gaactgtcaactcctccagtccaagagccacagtatatgagttcccttccatcgcagcaa
cgtaataggattccatctagagattcttctcaatattgtcctccaaagtttgtaccattg
acacgaaatggtctggccaacctttcccccaggtcttcgttacctctggtaccctccttg
ccacttcagcagcccccacagcaatcgcaaccaccaatgacattctgcacccaaaagagt
gataatggagaaggattgaggaaaaaccaaacacaaccaagcattttcttgcaagatact
aaatcagttgatagaaataggaactttttgagtaattgcacaattgggagggggcagttg
gacagtgatatttcatcagggccaagtgatgatattgccagaccaggacctagcaataca
gagacaaaccctgcagatatctcatccatttgtaatcacaatgagagtgaggaaagcgaa
gagcaggaagaaacactacctgcatctgtaaatcgtttgaacaaatcaacaacttggact
gaaggattcactgccaggaagtcaaaaccgtcaagttacagcaaacctggatttgacata
tccctatttggggcgccccttcatagtaattccctcttgggggaaagttctcatgagtca
tcattttatcccggtaagacaacctacggaggagcgtcagcgcaaaggaagacaaggtta
aatgtcacagggccttatcagtcacctttcccaatgcgtcaaaaaatgaaagtaaagcca
gtcaatacatctagaagtgctgcaactagttcaacggcacagaagattctggaaacacta
gaaaagatgtcaactccattgtctgaagctaagaaaatacctactgatgatacagtgttg
cgactgaattcttcattcaatcctacaagttataaaccagcacgccatagcataggctcc
taccttaacacaagacgtgaactacagaaatcccagagtggcccaccaacaggtaaagtt
agcacacctgtaccagcctccatcagtcgtaactaccagcgagtaacagttccccagaca
cagtcagacaagggtttcttaaatgcaaaagtacctacaaagatcagtcgaccaacccct
caggaaccagagaagacgccgagcattgcatcagggggtggaaaactgaaaagtaaaaag
tttcagcagcactttccaggacggaaggctgctgaagaggaggaagaagaggttgaaatg
cccaatttacgaacagaattcacattgccagtgattggtacccctcaatttgattttgga
acatcacaacttaccaagccagtggaaaagaaggcagaaaagtccaacgcagaatttact
ttcgcgacacccatacagaaaaccccaactaaacagtcggaccaggtcccacccacaaaa
acagacttcacctttagttctccactgaatatggaaaatgagagtaatttaaagcccaaa
tctgtcacatttgacattgggccagtgaaggacaaagaatctccagccgccttctcctca
cccgccttcaagtttggaagtcctatgggccttcagtccaagtctccatcaaaccttgga
gcatcaccagtccttcccagatcttcaggaggtctggttcctgccacggaactgaaatct
ggtagtgtgatggatgttcttggtaagtcaggggagagtggcttcagttttggctctacc
aagaccaacaaagacacaacaagcatgggtggattcaaacctgcatcagaactgaagcaa
ggcagtgtgatggatgttctgggtggatccagtgccaagacatcttcattcaatagcagc
tttgaacctgccaaagaactcaaaaaagggagtgttacagatgttcttggtaaaagttca
aaggaggacagcaaacccagtctgtccgccatgtttaaggtcgcagaaggcagctgggag
tgtgattcctgctgtatcaacaacacagctgatatcataaagtgtgtagcctgtggagcc
aaaaagccagatgctgcaggttctgcgtcaccctccagtcaaccaaacttgtcgtccgta
tttaaagttgcagaaggatcatggacttatgacagcagtatgatacagaataagtctact
gatacaaaatgtgtcccttgtcaggcaaataaaccaggatctgctggttctgctaattct
cctgtaaaagaaagttcaactgccaaattcgagaaacccacaggaaattgggaatgtgat
acctgtctagttccaaatgatggaacagcctccaaatgtatagcatgtgagacacctagg
cctggacttcaacttaaaccatcagtttctggaggattgaaattcggtggtgtacctgtc
agcaaatcaactggtagtgtagatcaaggtggttttaaatttggagatgcaagcaaagac
tcgtctactgacagtaaacctgtgagctcatttggagcaggacaattatcttttggaata
ccacctgtttcaagtagtaattccacctctgaaccatccaaaagctcaacaaatgtgact
gagggttttaaatttggaagtggagaagtttcctcaggtggtcctagtgtgggaggcttt
aaatttgggactggagctagtgcaccaaatatcactccaacaacaggcttcaaaataaat
tctatagttgtttctaaaagtgatactgtttctggtggttttcagatgccatctgtgaaa
tcttcacctgttggtgatcaaagtcagaataaaagtgaaagttctagtacatttaaatct
ctatttggtattgataaatctgaaataacatcgggtccaaagactgattctacctcagga
aaggtgtccaatggcagtttatcaacacctgcaaccggttcttcagctggtggttttcag
tttggagctcctacgaaacctcccactacatttagtgctgggccagatttcaccatggct
aagtcatctgaagagacacacaaaccagctcccttatttaatgtacaaccaccagccagc
actgttgcagccccatcattaaaaaggagtcacaatgaagaaaatggaccaagtgatacc
aagaggacaccatttatgttcaatgctggatctacagcagagcctgcaaagtcacttgga
aacaatattttgtttggtgcaccagcctcagcccctactcctgcaaccaaagcatcaata
ttccagacccctactgcccctacctcaagcatgtctacggcagtgtccacagctccagct
ggaggatttaattttgggatgggaggtaactctgcaccctctggaggacttggaaattcc
agctttggaactactgctaaaaatccttctggattcaacttcaatgttgattcaaacaaa
tcagctgtgttcaattttgttggtgggtctagtacagcagcaacaacagctcctgttttt
ggtgcaagctctatcaacacagatgtgaaaacttctgctccatcagcaccattttcattt
acggctcaaccctctgctcctgaagccagtcagggacttccgactccttttggatctgcc
caagattctacacctgcacctgcatttgcagccaatacatctgggtttggaactggaagt
aacatgtttagcagtagcagcagtaccccatcatttggagccaatggggcagttcctcca
tctgggtttggtgcagctgcggccgggttcaacaacacgtcaacaggaaatgctcccgcc
tttggtgcagccgccaccacctccaacactgcacctacaggaagctttagttttggaaat
ccacaacaatcattcaactttggtggacaatcaaatacaccggtaaacaatggagtgttc
cagtttggtgcaaaaccaggtgaaggaactcctgctgctgctgcaccacagactaatgca
ggatttaacttcaatgcttcatcttcatttaattttggacagagtacccaaccagccatg
caaggcggtaatgcctcatttaacataggatcaaacaatgatgcaagttcaggaaggaaa
ataaagagggctgtacgtaaaatacgtcgctga
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integrated database retrieval system
