Ylistrum balloti (Ballot's saucer scallop): 132557434
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Entry
132557434 CDS
T11245
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
132557434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yba03400
]
132557434
DNA repair and recombination proteins [BR:
yba03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
132557434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_II
MutS_IV
MUM1-like_PWWP
CIMR
Motif
Other DBs
NCBI-GeneID:
132557434
NCBI-ProteinID:
XP_060077902
LinkDB
All DBs
Position
Unknown
AA seq
1686 aa
AA seq
DB search
MGPKQTPAKKANTLFSYFNKSPSVKHSSTPKTDDKDILSPKRSPNQKDSSAGSATPRSKQ
TVDDFAVGDLIWAKLEGYPWWPSLVCTHPTDHIHYKQGKNPQVHVQFFDDPVSRAWIKAK
YVKPFKGSDDKEYQRGGQFFSHNPKVKQGACEADKAIKLTSDERLKLVVDLQPSDDEEEE
ESMDLDPDIFDNEMDEENDNSKENVSTTEEDKKQNSSKSPRKTPKKDSKRRSTRTPKPKR
RRIVESRDSEEDSDDEFKLKEDSDEPSSSSEDEGSSGVDEDEISDIETGSEPESPVKAPL
KRKRPQPKSKGVAKQTNSPDTTTPTLTSFSSSVKSSSTFTPTVGDKTKSRLAVFNAADSP
STSKATLTEQEANFPHLKLDFLQPHKIRDAKMRERTDPEYDPKTLHIPESFKKTTTPAMR
QWWELKAKYFDSILFFKMGKFYELFHMDAVVGVNELGIIFMKGEQAHSGFPEIAYNRYAE
TLIQKGYKVVRIEQTETPEMMNERLKTSSKQPTKFDKVVKREVCRVTTKGTQTFSFMDGD
SSGAENNFLIAIAEKEGSVEGCSTFGVCFVDTSIGKFYLGQFPDDRYCSRLRTLIAHYTP
TQVLFEKNKMTTKTQLVLKNNLTSVSKEGLASGSEFWESSKTLKRLAEEDYFKVNDEFVW
PATIKKMISETDALGMTAADEYSLAVRALGAVTWYLQYSLLDQELLSMNNFEEYCPLDGV
EVKEKKKESFGSRQHMVLDGVTLANLDITENSSTGTLEGTLLEQLDHCNTPFGRRLFRQW
LCAPLCNPVSINDRLDAVEDLIGCPDLVATTAEIIKKLPDLERLLNRIHSLGSASKSKNH
PDSRAIMFDEAKYSKKKIEDFLLTIDGFRTISKVAKKFQSHTKDFRSKLLTKTMTVSSEE
GDGYFPELHGDIEFFEHSFDHNKAKKEGVIVHNKGVDEDYDQAISDIQATERSLFNVNTX
QLHYLTNGCKTMTFWGTGKNRYQMEVPESALKRVPDDYELFSSKKGWKRYRTPEIDEYLS
ELTDAEERKDVALKDTLRRIFHSFDERYKAWEVALQCISVLDVLMSLASYSRCGDGVMCR
PEVVSPDGNTEPFLEIRDGRHPCIAKTFTGGEFIPNDTLIGMKDENEMETDEDDNADSKI
ILVTGPNMGGKSTLMRQVGLITVIAQMGCYVPAEKCRMTPVDRVFTRLGATDRIMAGEST
FFVELSETSAILQHATRHSLVLMDELGRGTATYDGTAIACSVVEELSRRVCCRTLFSTHY
HSLVEEFSHDPNIRLGHMACMVENEDETDPTQETITFLYKLSQGACPKSYGFNAAKLASI
PDENVVRHVKGILRSAEIHLTWTDLGHVKDILWSAEIHLTWTDLRHVKGILRSAEIHLTW
TDLGLVKGILRSAEIHLTWTDLGHVKDILWSAEIHLTWTDLGHVKDILWSAEIHLTWTDL
RHVKGILRSAEIHLTWTDLGHVKDILWSAEIHLTWTDLRHVKGILRSAEIHLTWTDLGHV
KGILRSAEIHLTWTDLRHVKGILRSAEIHLTWTDLRHVKGILRSAEIHLTWTDLGHVKGI
LRSAEIHLTWTDLRHVKHILWSAEIHLTWTDLGHVKHILRSAEIHLTWTDLGHVKHILWS
AEIHLTWTDLRHVKRILRSAEIHLTWTDLRHVKGILRSAEIHLTWTDLRHVKGILWSAEF
EKTSRK
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgaaacagactccagccaagaaagcgaacacgctgttttcttattttaacaag
agcccgtctgtaaagcattcttcaactcccaaaactgatgacaaagatatactgtctccc
aagcgatcgcctaaccagaaggactcgagtgcagggtcggcgactccgagaagtaaacaa
acagttgatgactttgctgttggtgatttgatatgggccaagctcgagggctatccttgg
tggccgtctctggtgtgtacacatccaactgatcacatccattacaaacaaggcaagaat
ccccaggtccatgtccagttctttgacgacccagtttcccgtgcctggatcaaggctaag
tatgtcaaacctttcaaaggttcagatgacaaagaatatcagagaggtggccagttcttc
tcccacaacccaaaggtaaaacaaggggcatgtgaagcagacaaagcaatcaaattgacc
agtgatgagcgactaaaactggttgtggatttgcagccttcagatgatgaagaggaagaa
gagagtatggatttagatcctgacatatttgacaatgaaatggacgaggagaatgataac
agcaaggaaaacgtcagcacaactgaggaggacaaaaagcagaactcttcaaagtctccc
agaaagacgccaaagaaagattcaaaacgacggtccacacggacacccaaacctaaacga
aggcggattgttgaaagtcgagacagtgaagaagattctgatgatgaattcaaactcaag
gaggactctgatgagccaagcagtagcagtgaggatgaaggcagcagtggtgtggatgag
gatgaaatctccgacatagagacaggctcagaaccagagtctcccgtcaaagctcctcta
aagagaaagcggccacagccaaaatccaaaggtgttgccaagcagaccaatagcccagac
acaaccaccccaaccctcaccagcttctccagcagtgttaaatcatcatccacatttacc
ccaactgttggcgataaaaccaagtcaaggcttgctgtctttaatgcagctgatagtcca
agtacttcaaaggccaccctgacagaacaggaggcaaatttcccacatctcaaactggac
ttcctccaacctcacaagatcagagatgctaaaatgcgtgagaggactgacccagaatat
gaccccaaaacactccacattcctgagagtttcaagaaaactacgacacctgccatgagg
caatggtgggaactgaaagcaaaatattttgactctattcttttcttcaagatggggaaa
ttttacgagctttttcacatggatgctgttgtaggtgtgaatgaactaggaatcattttc
atgaagggagaacaggctcactcgggatttccagaaatagcttataacagatacgcggag
acacttatacagaaagggtacaaggtcgtccgtattgaacagacagagactccagaaatg
atgaatgaacgcctgaaaacctcctcaaagcaaccgacaaagtttgacaaagttgttaag
cgggaagtttgtcgtgtaacaacgaaaggcacacagacgtttagcttcatggatggtgac
tctagtggtgctgagaacaatttcctcattgccattgcagaaaaggagggtagtgtggaa
ggttgcagcacctttggagtgtgttttgttgatacttctatagggaagttttatcttggt
cagtttcctgatgaccgatactgctccagactacggacattgatagctcattacacccct
acacaggtattatttgaaaagaataaaatgacaacaaagacacaattagtgctaaaaaac
aatctgacatctgtgtcaaaagaaggcttagcatctggttcagagttctgggaaagttcc
aaaacactcaaacgccttgctgaagaggattattttaaagtcaacgatgagtttgtatgg
ccagctacgataaagaaaatgatcagtgagactgatgctttaggaatgactgctgcagac
gaatattctctagctgtacgagcactgggggcagtcacatggtatctacagtacagtcta
cttgaccaagagctcctctctatgaacaattttgaagagtactgtcctttggatggtgta
gaagtgaaagagaagaaaaaggagagctttggtagtcgtcaacacatggtgttggatgga
gtgaccttagctaaccttgatatcacagaaaactcgtccactggcacattggagggtacg
ctactggagcaactagatcactgtaataccccctttggtcgacgtctgttcagacaatgg
ctgtgtgccccactttgtaatcctgtctccattaacgatcgactggatgctgtagaggat
ctcattggctgtccagatttagttgctacaactgcagaaattataaaaaagttacctgat
ttagagagattattaaacagaatccacagtctgggatcagcatcaaaaagtaaaaaccac
cccgattctcgtgccatcatgtttgacgaggccaagtacagtaaaaaaaagattgaagac
ttccttttgacaatagatggattcagaaccatatccaaagtagccaagaagtttcaaagt
catacaaaggacttcaggtccaaattattgacaaagaccatgacagtatcgagtgaggaa
ggtgatggttattttccggagcttcatggtgacatagagttcttcgagcattcatttgac
cacaataaggcaaagaaggaaggcgtcattgtacacaacaaaggtgtagatgaggactat
gatcaggccatatctgacatccaggccactgagcggtcactattcaatgtaaacacctag
caacttcattacctgacaaatggttgtaagacaatgacgttctggggtacggggaagaat
cgttatcagatggaggttccagagagtgcattgaagcgtgtaccagatgattatgaactg
ttctcatcaaagaaaggatggaagcggtacaggacaccagaaattgatgaatatttgtca
gaactcacggatgccgaagaaagaaaagatgtagcattaaaagatacactgcgaaggatt
ttccatagttttgatgagaggtacaaggcctgggaggtagctttacagtgtatttctgta
ttggacgttctgatgtcactggcttcctacagtcgctgtggtgatggagtcatgtgtcgc
ccagaagttgtctcccctgatggtaacactgagccattcctggagatcagagatggtcgt
catccatgcattgcaaagacatttactggcggagaatttattccaaatgacacgcttatt
ggcatgaaggatgagaatgagatggagacagatgaagatgacaatgcagacagtaagatc
atcctggtaacaggaccaaacatgggcggtaaatccacattgatgcgacaagtgggcctc
attactgttatagctcaaatgggttgctatgtacctgctgagaaatgtcgcatgacacca
gtggaccgtgtatttacaaggctaggtgctacagacagaattatggccggggaaagtaca
tttttcgtggagctgagtgagacatcggctattttacagcatgctacgcgacactcctta
gtcctaatggatgagttaggaagaggtacagcaacatacgacgggacagctattgcatgt
tccgttgttgaggaactctccaggcgtgtttgctgtcgtactcttttctctacacattat
cattcattggtggaagaattctcacatgacccgaacatcagactaggtcacatggcatgt
atggtggagaatgaagatgagacagaccctacacaggagactatcactttcctctacaaa
ctgtcacaaggagcctgtcccaagagttacgggttcaatgctgcaaaactagccagtatc
cctgatgagaatgtagtgagacatgtgaaaggtattctcaggtcagctgaaatacacttg
acctggacagatctgggacatgtgaaagatattctctggtcagctgaaatacacttgacc
tggacagatctgagacatgtgaaaggtattctcaggtcagctgaaatacacttgacctgg
acagatctgggacttgtgaaaggtattctcaggtcagctgaaattcacttgacctggaca
gatctgggacatgtgaaagatattctctggtcagctgaaatacacttgacctggacagat
ctgggacatgtgaaagatattctctggtcagctgaaatacacttgacctggacagatctg
agacatgtgaaaggtattctcaggtcagctgaaatacacttgacctggacagatctggga
catgtgaaagatattctctggtcagctgaaatacacttgacctggacagatctgagacat
gtgaaaggtattctcaggtcagctgaaatacacttgacctggacagatctgggacatgtg
aaaggtattctcaggtcagctgaaatacacttgacctggacagatctgagacatgtgaaa
ggtattctcaggtcagctgaaatacacttgacctggacagatctgagacatgtgaaaggt
attctcaggtcagctgaaatacacttgacctggacagatctgggacatgtgaaaggtatt
ctcaggtcagctgaaatacacttgacctggacagatctgagacatgtgaaacatattctc
tggtcagctgaaatacacttgacctggacagatctgggacatgtgaaacatattctcagg
tcagctgaaattcacttgacctggacagatctgggacatgtgaaacatattctctggtca
gctgaaatacacttgacctggacagatctgagacatgtgaaacgtattctcaggtcagct
gaaatacacttgacctggacagatctgagacatgtgaaaggtattctcaggtcagctgaa
atacacttgacctggacagatctgagacatgtgaaaggtattctctggtcagctgaattt
gaaaagacctcgagaaaatga
DBGET
integrated database retrieval system
