Ylistrum balloti (Ballot's saucer scallop): 132557774
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Entry
132557774 CDS
T11245
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132557774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yba03019
]
132557774
Messenger RNA biogenesis [BR:
yba03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
132557774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
132557774
NCBI-ProteinID:
XP_060078283
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MAAVEAPTAPVAAEDDEAWLYGDENKEGAQTNGDTTETTEASKEEKKEDREAGELSGEEE
SQEKDDDDDSDDDVQVTIGDIQTFPLNEAPRNLFKAQGGYQKPAGTAAASKSQSGTTTTV
KGVDLETPGTINGVNQYEFDLDGLQADEKPWRKPGADITDYFNYGFNEDSWRLYCEKQRR
HRMDANPGSVTRIYVHQPTSSLNRNEKKDVLHPPGTETPQTVPVIGSRGKTNPTPRKMAG
TIDVIGSTARDSRRPDSSSMGDPIPVAGSRKSYNTSVPPPGMSVHPTQGMPPMPDYSIPP
PGMTLPPGMHPPPGPAPPGVPPGIPPPGFPPVEFEAYYPPTGQTSVSHYDDRNFSSHTTY
TSSYNQSNPWDNNRQEGGYRWGSDYSRERSPDRSESEYSRDTYWRDRSDRDSYRDRDRSR
SRERDRPRDHRHRDEKHRSRRKHRDDEDSDHHRSKHKKSKKSKKDKDDDAYDPSNPSQDD
MAKGE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtagaagcacccacggcgccagttgcagctgaagatgacgaagcctggctt
tatggagatgagaataaagagggagcccaaacaaatggtgacactacagagacaacagaa
gcttccaaagaggagaaaaaggaagacagagaagcaggagagctgagtggtgaggaagaa
tcgcaggagaaagatgatgatgatgattctgacgacgacgttcaagtgaccattggtgac
atacagacgtttccactcaacgaagctcccagaaacttatttaaagcacaaggtggctat
caaaaaccagcagggacagcagctgcatccaagtcccagagtggaacaacaaccacagta
aagggggttgacctggaaactccaggaactatcaacggagtaaaccagtatgaatttgat
ctggatggactacaggctgatgagaaaccctggagaaaaccaggtgcagacatcacagat
tacttcaactacggcttcaatgaagactcatggcgcttgtactgtgaaaaacaaagacga
cacagaatggatgctaacccaggatcagtgaccagaatctatgttcatcagccaacatct
tctttgaacagaaatgaaaagaaggatgtgttacatccaccaggtacagaaactccacag
acagttcctgtgattggttctcgcggcaaaacaaatccgacaccccgaaagatggctgga
acaattgatgttattggcagcacagcaagagactcaagacgaccagactcgtcctccatg
ggagacccaattcctgtagctggcagcagaaagtcctataacacatcagtacctcctcct
ggtatgtctgtacaccctacccaggggatgccccctatgccggactactctataccacct
ccaggcatgacacttcccccaggcatgcatccacctccaggaccagcacccccaggtgtc
ccaccaggtattcctccacctggatttcctcctgtggaatttgaggcctactacccgccc
acaggacagacatctgtaagtcattatgatgacaggaatttttcatcccatacaacttat
acatccagttataaccagtccaatccttgggataacaatcgtcaagaaggtggttacaga
tggggcagtgactacagtagggagcgcagtcctgacagatcagaatctgaatacagcagg
gatacttattggagagaccgaagtgatcgtgacagctacagagatcgtgaccggtcaagg
tcacgggaaagagataggccgagagatcaccgccatagagatgaaaagcatagatcaaga
aggaaacaccgagatgatgaagattctgaccatcaccgttctaaacacaagaaaagtaag
aaatctaagaaagacaaagatgatgatgcttacgacccatctaaccctagtcaggatgac
atggcaaaaggagaatag
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