Ylistrum balloti (Ballot's saucer scallop): 132558106
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Entry
132558106 CDS
T11245
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba04382
Cornified envelope formation
yba04512
ECM-receptor interaction
yba04518
Integrin signaling
yba04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132558106
04518 Integrin signaling
132558106
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132558106
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
132558106
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yba04147
]
132558106
00536 Glycosaminoglycan binding proteins [BR:
yba00536
]
132558106
Exosome [BR:
yba04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
132558106
Glycosaminoglycan binding proteins [BR:
yba00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132558106
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
132558106
NCBI-ProteinID:
XP_060078616
LinkDB
All DBs
Position
Unknown
AA seq
1761 aa
AA seq
DB search
MKFRNFVFVLLIVVTVSLDLVAGAACKGCAPPCVCVGQKGYKGESGLRGVRGPPGMPGFL
GPEGPTGPKGGKGDLGQEGAIGPKGLRGQEGLAGFHGNPGAPGLKGLEGPVGPQGYPGCN
GTKGEPGKPGRPGQSGIQGRRGIDGLPGLKGEPGDGQTLTPGPKGDPGEPGPPGQDGQPG
YRGLPGDRGYEGNPGLQGLPGADGLPGPKGDMGEARRGLKGEQGDEGYPGQQGPPGPPSQ
EGKPIDEVIFGPNGEAGIPGLPGNDGPRGLPGDIGEDGIKGPLGPKGMKGSQGNQGRRGK
RGKDGPAGAFGPKGMAGDKGQVGNSGLKGLKGFSGDFGFQGQRGDPGPRGLPGEIIGSGE
GRPGPRGISGDLGDDGPKGFPGQDGPTGQQGRIGSIGPPGPNGLPGLRGPPGFSVKGDRG
FTGDPGPDGLPGTFGVPGETGSVGLPGEPGRTVVGLPGLRGRPGRDGLPGLTGFPGSPGL
AGLPGLPGIGRDVTGPQGVRGLEGDRGVPGVNGLDGLDGDFGLKGERGADCGICQDGLPG
FKGEMGEDGLPGLPGFDGPPGEQGLKGQGGSRGLPGLSGFTGRKGAQGPPGFSGGKGIKG
DPGDVPITITERPKGISGDPGFDGNQGQDGTPGFPGERGPVGFPGAQGMKGEMGKFGIDG
LDGIDGMKGTKGNKGLPGDAFPGFPGMNGEKGFAGIPGQNGAKGVIGEKGEPGLPILIPG
IKGDVGTSGRPGVDGMIGLPGLKGMKGDRGDDGLTGISGNRGARGDDGGNGVIGERGRVG
PKGYPGLPGSPGRDGIPGVKGQTGENGLDGFPGLRGEKGFPGNTPDVLLPGLPGEPGLPG
LSGENGFPGENGRVGFPGVPGLKGEKGYEGEPGRPGTPGLSGRPGDSGLTGIRGQPGNRG
RSGQKGFPGLNGAPGDSGLPGLNGVEGERGVTGQPGLPGPDGGDGLPGPRGERGLQGLPG
LSGLKGFKGDIGATASDGPPGLPGLPGVKGSRGSVGPAGFAGVPGAAGVYGPKGETGPAG
PNGFPGIQGPPGLPGLQGIPGDIGLRGIPGAPGLDGLRGANGLKGQPGEIGSSRPGENGR
RGRPGESGIPGLDGLKGFKGQSGEMGRPGLEGFKGEAGINGIRGEIGRRGGPGLKGPNGD
DGRPGVAGPKGQKGQGGAAGLPGQSGGVGAPGEVGPAGEDGDFGGRGEPGFTGNPGLDGL
VGMPGEDGSRGSNGIPGLVGLPGEDGQSGINGERGQVGVPGSDGFDGVPGGPGRPGDVGL
DGLPGERGEDVIFGDIGPRGDEGITGEDGFPGEKGPVGTPGLPGFPGLKGMRGESGFSYP
GEAGRRGEPGTPGFDGFAGQNGFKGRPGLSGLSGIKGDRGSDGIPGEEGRIGDQGSTGFP
GLPGLDGLPGSKGDTGVRGFQGENGAVGFPGEDGLPGLQAFPGDRGFDGFKGEPGEPGPV
DFTQLPRAPKGQRGESGEPGYFGESGRRGVPGFEGRAGLPGDKGSLGLNGLPGLKGMKGA
QGLDGLTGESGRNGYPGPIGPQGLSGRPGDLGGSAGFYFSIHSQTSITPECPEGTYRMWE
GYSLVHVIGNGRAHGQDLGSPGSCLRRFSTMPIMFCNINNVCNVAARNDYSYWLSTEEPM
TPMMEPITGPPLQNYISKCSVCEAPSEVVTIHSQTVQIPNCPVGYRGMWIGYSFLMSTGA
GGQGAGQSLQSPGSCLRDFRSAPIIECHGKGTCNYYATSFGYWLATLLQGDINSFRQPVP
ETIKAGSLRNRISRCQVCVRS
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaggaattttgtattcgttcttctgatcgtagttaccgtttctttggattta
gtcgccggagcagcttgtaaaggttgtgctccgccatgtgtgtgtgtaggacagaaaggt
tacaagggtgagtcaggcctaaggggcgtgcgaggacctccaggaatgcccggatttttg
ggacctgaaggaccaactggccccaaaggtggtaaaggtgatttaggacaagaaggggcc
attggacccaaagggttgaggggtcaggagggacttgctggattccatggaaaccctggt
gcaccgggtctgaaaggactagaaggtcctgttggacctcaaggctacccaggatgcaat
ggtacaaagggagagcctggtaaacctggtagacctggtcagtcaggaatccaaggacga
cgaggtatcgatggacttccaggactgaagggtgagcctggtgatggacaaacattaaca
cctgggcctaaaggtgacccaggagaaccaggaccaccgggacaagatggccagcctgga
taccgtgggttgcctggagaccgaggttacgagggtaaccctggattacagggattacca
ggggctgatggtttgcctggccccaaaggagacatgggagaggcaaggcgtggactcaag
ggagaacagggtgatgaaggataccctgggcagcaaggtccacctggtcccccatcacag
gagggaaaaccgatagatgaggtcatatttggacctaatggtgaggcaggaattccagga
ctgccgggcaacgatggtccacgaggccttcctggtgatataggggaagatggtataaag
ggtccactaggtcctaagggaatgaagggaagtcaaggtaaccagggcagaaggggtaag
cgtggaaaagatggccctgctggagcatttggtcctaaaggaatggcaggtgacaaggga
caagttggaaacagtggacttaaaggtcttaagggattttctggtgattttggattccaa
ggtcagagaggagatccaggaccaaggggtttacctggagagatcattggctctggggaa
ggacgtccaggacccaggggaatttcaggggatcttggagatgacggacctaaaggcttt
ccaggtcaagatggaccaacaggtcagcagggaaggattggatccattggtcctccaggg
ccaaatggccttccaggtttaaggggacccccaggattctcagtgaagggtgacagagga
tttactggtgatcctggtccagatggtctgccaggaacttttggagttcccggagagaca
ggaagtgttggactgcctggtgagcccggtcgtacagtggttggcctgccaggtttgcgt
ggacgacctggtcgtgatggtttacctggactcactggttttcctggtagtcctggactt
gctggtctcccaggccttcccggaattggtcgagatgtcactggaccccaaggagtaaga
ggtttggaaggagatcgtggagttcctggtgtcaatggacttgatggtcttgatggtgac
tttggtttgaagggtgaacgaggtgcggactgcggaatttgtcaagatggattgccaggt
ttcaagggagagatgggagaagatggtttaccaggtctgcctgggtttgatggacctcct
ggagaacaaggtttgaagggacaaggtggtagtcgaggtctcccaggattgtcagggttc
acaggccgaaagggagctcagggtcccccaggtttctctggaggtaaaggaataaaggga
gatccaggagatgtccccataaccatcacagaaaggccaaaaggaatatccggtgatcca
ggctttgatggaaatcaaggacaggatggtactcctggatttccaggagagagggggcct
gttggctttcctggtgctcagggaatgaagggtgagatgggaaagtttgggattgatgga
ttggatggaattgatggtatgaaaggtaccaagggaaacaaaggacttccaggtgatgct
ttcccaggctttccaggaatgaatggagagaaaggatttgctggcattccaggacaaaat
ggagctaagggagttattggtgaaaagggagaaccaggtttaccgatcctcatacccgga
atcaaaggtgacgtgggaacatcgggcaggcccggtgtagacggtatgataggcctccca
ggtctcaagggtatgaaaggagaccgaggtgatgatggactgactggaatatctggaaac
cgtggtgcacgtggtgatgatggtgggaatggagtaattggtgagagagggcgtgttgga
cccaagggttacccaggactgccagggtcaccaggacgtgatggaattccaggagtaaaa
ggccagacaggagagaatggtcttgatggattccctgggctcaggggagaaaagggcttc
cctggtaacacaccagatgtcttgttaccagggttaccaggagaacctgggttgcctggt
ctctcaggagaaaatggatttccaggagagaatggccgagtaggctttccaggggttccg
gggctcaaaggagaaaagggatatgaaggagaaccaggccgcccaggtaccccaggatta
tctgggcgccctggtgatagtggcttgaccggaatccgtggccaaccaggaaatcgtggc
cgctctggacaaaaaggtttccctggactgaatggtgcccctggtgacagtggcctgcca
ggactgaatggtgtggagggagagcgtggtgttactggccagccaggactcccaggacca
gatggaggtgatggattaccaggaccacgaggagaaagaggattgcagggacttccaggc
ctatcaggattaaaaggcttcaagggagacataggtgctactgccagtgacgggccacct
ggtttaccagggttaccaggtgtcaaaggtagcagaggaagtgtggggcctgcagggttt
gcaggagtccccggggcagcaggagtatatggaccaaagggagaaacaggacctgcagga
cctaacggtttcccaggtatccagggaccaccaggattaccagggcttcaggggattcca
ggagatataggattgagaggaatacctggagcacctggattggatggactgagaggtgcc
aatggtctcaagggtcagcctggtgagattggcagctccaggcctggcgagaatggtcgc
cgtggaagaccaggagaaagtggtatacctggtcttgatggactaaagggatttaaggga
cagtcaggtgaaatgggacgcccaggtttggaaggctttaagggagaagcaggaataaac
ggaataagaggagagatcggtcgtagaggtggtccagggttgaagggacctaatggagat
gatggtcgtccaggtgtggctggaccgaaaggacagaagggacaaggtggggctgccgga
cttcctggtcaaagcggtggtgttggagctccgggagaagttggccctgctggagaggac
ggagattttggtggacgtggtgagcctggtttcacaggaaacccaggtctggatggactg
gttggtatgccaggagaggatggtagccgtggttccaatggtatacctggacttgtgggg
ttaccaggggaggatggtcaatcaggcatcaatggggagcgtggacaggtgggagtacca
ggaagtgatggatttgatggtgttccaggaggacctggacgcccaggtgatgttggattg
gatggtctacctggtgaacgtggagaagatgtcatttttggtgacatcggaccccgggga
gatgaaggaatcactggagaagatggttttcctggagaaaaagggccagttggaacccct
gggcttccagggttccctggactgaagggaatgaggggggagtcaggtttctcctaccca
ggagaggcaggaagaagaggagagccaggaactcctggatttgatggttttgctggacaa
aatggcttcaaggggcgacctggcctaagtggtttatcaggaataaaaggtgatcgtggc
tcagatggtattcctggagaggaaggacgtattggtgaccaaggcagcacaggatttcct
ggacttcctggattggatggtttgccaggatctaagggagacactggtgtccgagggttc
caaggggaaaatggtgctgtaggatttccaggcgaagatggattacctggactccaagca
ttccctggagatcgtggatttgatgggttcaagggtgagcctggagaacctggaccagtg
gattttactcaactaccacgagctcctaaaggacaaaggggtgaatctggtgagccagga
tattttggggaatccggtcgccgtggagttccaggttttgaaggaagagctggcctgccc
ggagacaagggatcactaggactgaatggtctccctggtctgaaaggaatgaagggagct
cagggtttggatggtctcacaggagagtccggtcgtaatggatacccaggccctattggg
ccacagggattgtcaggaaggccaggggacctgggaggctcagccggattctacttttca
atacatagtcagacatccattacacctgaatgtccagaggggacctacagaatgtgggag
ggctattccctcgtccatgtaattggaaacggccgtgctcatggccaagaccttggctca
ccaggcagctgtctgaggcgtttcagcacgatgcccatcatgttctgcaatatcaacaat
gtttgtaatgtggctgctagaaatgactacagctactggctgtctactgaggaacccatg
acacccatgatggagcccatcacaggacctccactacagaactatatcagtaaatgttct
gtctgtgaagctccctcagaggtggtgactatacatagtcagaccgtacaaattcctaac
tgtcctgttggctatagaggcatgtggatcggttacagcttcctcatgtctactggagct
ggaggacaaggagctggccagagcctccagtccccaggatcatgtctccgtgatttccgc
tcagctccgatcatcgagtgccacggcaagggcacatgtaactactacgcaacatcattt
ggttattggttagcaacacttctacagggagatataaattcattcagacagccagtacca
gaaactatcaaagcaggaagtcttaggaacaggattagtcgctgtcaagtctgtgtgaga
tcatga
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