Ylistrum balloti (Ballot's saucer scallop): 132558939
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Entry
132558939 CDS
T11245
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yba03009
]
132558939
Enzymes [BR:
yba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132558939
Ribosome biogenesis [BR:
yba03009
]
Eukaryotic type
90S particles
Helicases
132558939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
TrwB_AAD_bind
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
132558939
NCBI-ProteinID:
XP_060079542
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MDGFDLFKKLGVGVKFNIERFQKDAERFKLTRPASQQQNQIDKTQNPTPKRKASKDTDQA
RKKFKEESDDSSGEEDELYSEDDIVSDISSNIDQETEPELQLLGSIKSQNGKISHQKDRC
KKTTTKDSSLEKRVQIQREQLNHVKNKHRIHTHGTDVPRVLETFDNLVDEYNVHPQLVQN
IKAAGYDLPTPIQMQAIPIMLHRRELMACAPTGSGKTAAFIIPILHHLKEPRNQGFRALV
LAPTRELAKQTCREFQKLSEGRGFRIHYIEKASTAIKKFGPKSSQKFDVLVSTPNRLVYM
LKQDCLRLNSVEWLVVDESDKLFEEGKTGFRDQLAEIYKACDGPNLRRAMFSATFAFDVE
EWCKLNLDNVIQAYIGAKNSATETIQQELKFVGTESGKLFAIREIIQQGIEPPVLVFVQS
KDRAKQLFRELIYDGINVDAIHSDRTQLQRDNVVKSFRAGKIWIMICTELMGRGIDFKGV
NLVINYDFPNSAISYIHRIGRTGRAGRPGRAVTFFTEDDVTNIRSIANIMREAGCPVPDY
MLQIKRLSKKKRKKLSKRVPKRDCISTNLKARRLQAVINEKRKKKSDKKSKKTKASMDTD
ISSELDDQIDKQNLEHASYTESSTDGPRKTKKDRSKARTKMKKNKKSGKPVK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggatgggtttgatttgttcaaaaaacttggtgtcggtgttaaatttaatattgaaagg
tttcagaaagatgccgagcgatttaagttaacccgtccagctagccaacaacaaaaccaa
attgataagactcaaaatccaactcccaaaaggaaagcatccaaggacactgatcaggca
aggaaaaagttcaaagaagaatctgatgattccagtggtgaagaagatgagttgtattca
gaagatgacatagtatcagacatttcctcaaatattgatcaagagacagagccagaactg
caattacttggcagcatcaagtctcaaaatggaaaaatatcacaccagaaggacaggtgt
aagaaaacaactactaaggacagctctttagagaaacgggttcagatacaaagagaacag
ctcaaccatgttaagaacaagcacaggatccatacccatgggacagatgttccccgtgtg
ctggaaacttttgataatcttgtcgatgagtacaacgttcatcctcaacttgtccagaac
attaaggctgcaggctatgaccttcctactcctatacagatgcaagctattcctatcatg
ctacatagaagggagttaatggcatgtgctccaacagggtcagggaaaacagcagctttt
atcatcccaattcttcaccacctgaaggagccaaggaaccagggatttagagctctggta
ttagctcctaccagagagttagcaaaacagacatgcagagaatttcaaaagctttccgaa
ggaaggggctttaggatacactatattgagaaggccagcacagctattaagaagtttggc
cccaaatcatctcaaaagtttgatgtcctggtatcaacacccaacagactggtgtatatg
ctgaaacaagactgtttacgacttaacagtgttgaatggcttgtggtcgatgaatctgat
aaattgtttgaggaaggcaagacaggattcagagatcagttagctgaaatctacaaggcc
tgtgatggtccaaacttacgacgtgcaatgtttagtgccacatttgcttttgatgtggag
gaatggtgtaaacttaacctggacaatgtcattcaggcttatataggagctaagaattca
gcaacagaaactatacagcaagaattaaaatttgttgggacagaatctggaaaactgttt
gctatcagagaaataatccagcaaggtatagaaccaccagtcttagtgtttgtccagtcc
aaagatcgtgcaaagcagttgtttcgggaactcatctacgatgggattaatgttgatgct
atacactcggacaggacacaacttcagagagacaatgtagtgaagagtttccgggctgga
aagatctggattatgatttgtacagaactgatgggccgtggaattgacttcaagggagtc
aacctggttatcaattatgacttcccaaacagtgcaatcagctatatccacagaataggt
aggacaggtcgagcagggagaccaggaagggctgtgaccttctttactgaagacgacgtt
accaatatccgcagtatcgctaacatcatgcgagaagctggctgtcctgtcccagactac
atgttacagataaaacgtctgtccaagaaaaagagaaaaaagttgtccaagagagtgccc
aagagagattgtatctccacaaatctcaaagcaagacgcctacaggcagtaattaatgaa
aaaaggaaaaagaaatcggataaaaagtctaagaaaacgaaagcatccatggatactgat
atatcaagtgaattggatgaccagattgacaaacagaatcttgaacatgcatcttacaca
gagtcttcaacagatggaccgaggaaaacaaagaaagacaggtcaaaagctcgcactaag
atgaagaagaataaaaagtcaggaaagcctgtaaagtga
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