Ylistrum balloti (Ballot's saucer scallop): 132559140
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Entry
132559140 CDS
T11245
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2-like
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132559140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yba03019
]
132559140
Messenger RNA biogenesis [BR:
yba03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
132559140
U7-dependent histone pre-mRNA processing factors
132559140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF100_C
Beta-Casp
RMMBL
Motif
Other DBs
NCBI-GeneID:
132559140
NCBI-ProteinID:
XP_060079732
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
GKDTEEGCAVHKGKDTEEGCAVYKGKGTEEGCAVYKGKGTEEGCVVYKGKDTEEGCTVYK
GKGTEEGCAVYKGKGTEEGCAVYKGMGTEEGCAMYKGKGTEEGCTVYKGKGTEEGCAVYK
GKDTEEGCTVYKGKGTEEGCAVYKGKGTRRVVLCTREWVLRRVVLCTREKVLRRVVLCTR
EKVLRRVVLCTREKVVLSSVPDLQCGFSRDLFVAWCGSSKNSIILTNRTSPGTLARQLID
NPENKTVTMEIRRRIKLEGGELDDYLKKKQEKEAEMARVKNEQDNDLDDESSDESEAEMD
IDTYASGTKGKHDLMMKSEGKSRTGFFKQAKKAYPMFPYTEEKIKWDEYGEIIRPEDYTI
LEVPVQDEEMTMDSVSREVESMQEVSEVPTKCVSATVTLDINANIQYIDFEGRSDGESIK
KILSQIKPRQLILVRAVSEATEALADYCRKLEGMVQGKIFSPKVGDVVDVTRESHIYQVR
LRDYVVSALDFQKAKDTELAWIEGMLDMSQGKTDTSPMYELEDGEMSEEARERRLQQEKD
DEEEKAMDIVPTLESVQPHQIEGHKAVFVNEPKLSDFKLVLLQEGFQAEFIAGVLICNSS
VAVKRNEAGKIQLEGSICEDFYKIRELLYSQYAVV
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
ggaaaggatactgaggagggttgtgctgtgcacaaaggaaaggatactgaggagggctgt
gctgtgtacaagggaaaaggtactgaggagggttgtgctgtgtacaagggaaaaggtact
gaggagggttgtgttgtgtacaagggaaaggatactgaggagggttgtacagtgtacaaa
ggaaagggtactgaggagggttgtgctgtgtacaagggaaagggtactgaggagggttgt
gctgtgtacaagggaatgggtactgaggagggttgtgctatgtacaagggaaaaggtact
gaggagggttgtactgtgtacaagggaaaaggtactgaggagggttgtgctgtgtacaag
ggaaaggatactgaggagggttgtacagtgtacaaaggaaagggtactgaggagggttgt
gctgtgtacaagggaaagggtactaggagggttgtgctgtgtacaagggaatgggtactg
aggagggttgtactgtgtacaagggaaaaggtactgaggagggttgtgctgtgtacaagg
gaaaaggtactgaggagggttgtgctgtgtacaagggaaaaggtggtgctgtctagtgtc
ccagatctgcaatgtggcttttcacgagacctctttgtggcatggtgtggcagctccaaa
aacagtatcattttgaccaatcgtacgtctccaggcactcttgcccgacaactcatcgac
aacccagaaaacaagacagttacgatggagatacggaggagaattaagctagaaggaggt
gaattagacgactacttgaaaaagaaacaagaaaaagaagcagagatggcaagagtgaaa
aacgagcaggataatgaccttgacgatgaatccagtgatgaaagtgaggcagaaatggac
attgatacatatgcttctggcacgaaaggaaaacatgacctcatgatgaaaagtgaaggt
aaaagcaggacaggctttttcaaacaagccaagaaggcatatcccatgtttccttacaca
gaggagaagataaagtgggacgaatatggagaaattattagaccagaagattacaccatt
ttagaagtacctgtacaggatgaagaaatgaccatggacagtgtgtcacgtgaggtggaa
tcaatgcaagaagtgtctgaggtacctacaaagtgtgtgtctgccacggtcacactcgac
atcaatgccaacatacagtacatcgactttgagggccggtcggatggggagtccattaaa
aaaatccttagtcagattaaaccaaggcagctgatactcgtacgagctgtgtccgaggct
actgaagccctagcagactactgtcgcaaactagagggcatggttcagggcaagatcttt
tctccaaaagtgggtgatgttgtggatgtaaccagggaaagccacatctaccaggtaaga
cttagggactatgtggtcagtgcactggacttccagaaggctaaggacacagaactggcc
tggatagaaggcatgctggacatgagtcaggggaagacggatacaagcccaatgtacgag
ttagaggatggtgaaatgtcagaggaggcaagggagaggagactacagcaagagaaggat
gatgaggaggaaaaagcaatggacattgtgcctaccctggagtcggttcaaccacaccaa
atagaaggacataaagctgtattcgtcaatgaacctaagctctctgacttcaaactggtt
ctactacaggaaggcttccaggccgagtttattgcaggggtcctgatctgtaacagtagt
gtggctgtcaaaaggaatgaagctggcaaaattcagctggagggttcaatatgtgaagac
ttttacaaaatacgtgaactgttgtatagccagtatgctgttgtgtag
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