Ylistrum balloti (Ballot's saucer scallop): 132560131
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Entry
132560131 CDS
T11245
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yba03009
]
132560131
Enzymes [BR:
yba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132560131
Ribosome biogenesis [BR:
yba03009
]
Eukaryotic type
Pre-60S particles
Helicases
132560131
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
132560131
NCBI-ProteinID:
XP_060080763
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MEPTWEDLPVTLCDSTLNTLKKLKFVKATPVQAACIPLFIGNKDVAAEAVTGSGKTLAFL
IPILEKLDKHTTETGKLKKQEIFSIILTPTRELAFQIKEVIDHFLEHHDGVASILFIGGE
NLHSDVNKFKSNGGHIVVATPGRFESLLEKKWDGCNLAASVKSLEILVLDEADRLLEMGF
EASINTILSFLPKQRRTGLFSATQTDEVEKLIRAGMRNPVRINVKEKRESSDSSGIRRTP
ASLENQYMILDSDEKFNQLIHFLHINRELKILVFFSTCAGVDYFSKAIQHILKKSQILSI
HGKMKKKRNKIFSRFRTLESGALLCTDVMARGVDIPEVDWVVQYDPPSSANSFIHRCGRT
ARIGNKGTALIFLLPTEDAYVKFIEINQKAPLKMIEKADSVQNHLPKLQKMSMKDRAMMD
KAAKAYVSCVQSYVKHECNMIFRVKDLDFGRLATGFGLVRVPKMPELKGKVLTNFIAPDV
DWMTIPYKDKAKEKMRQDQMKNGEIVKKGKPKKPLQTKSWSQHKDRKDRKKKRKEKLGKR
KQEISEEDIDDIDKDLKLMKKLKKGKISKEDFDKEFADDSDSDES
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggaacccacgtgggaggatttaccagttacactttgtgattctaccctaaatacactg
aaaaagctaaaattcgtgaaggctacacctgttcaagcggcatgtataccactttttatt
ggcaacaaggatgttgcagctgaggcagttactggtagtggcaaaacgttagcttttctt
attccgattcttgagaaacttgataaacacacgactgaaacgggaaaactgaagaaacaa
gagatattttctataatcctaacacctacgagagaactagccttccaaatcaaagaggtc
attgaccattttcttgaacaccacgatggcgtagcttctattttatttattggtggcgaa
aacctacacagtgatgtcaataagtttaagtcaaacggaggtcacattgtggttgctaca
cccggaagatttgagtctcttttagagaaaaaatgggatggatgtaatcttgctgccagt
gtcaaatctctagaaattcttgtgttggatgaagcagatcgtttgttagaaatgggtttt
gaagctagcataaacacaattctgagctttctaccaaaacagcgtcggacaggcttgttt
tctgctacccaaacagatgaggtagaaaaacttatcagggcggggatgagaaatccagtg
cggattaacgtaaaggaaaaaagagagagctctgactcaagtggcataagaaggacacca
gcatctttagaaaaccagtacatgatactggacagtgacgaaaagtttaaccaactcatt
cacttcctacacattaacagggaactcaaaattttggtgtttttcagcacatgtgctggt
gttgactatttttctaaagccatacagcatatcttgaaaaaatctcagatcctctccata
catggcaaaatgaagaaaaagaggaacaagatattctccagattcagaaccttggaaagt
ggtgccctcttgtgtacagatgtcatggccaggggtgtggatatcccagaagttgattgg
gttgttcaatatgatccacctagttcagcaaactcctttatccacagatgtggacgtaca
gcaagaatcggcaataaagggacagctcttatatttctgttaccaactgaagatgcttat
gttaaatttattgaaattaatcagaaagcacctttaaagatgatagaaaaagcagacagt
gttcagaatcacctcccaaaacttcagaaaatgtccatgaaagaccgggccatgatggac
aaagcagccaaagcatatgtgtcttgtgtgcagtcttatgttaaacatgagtgcaacatg
atctttagagtgaaagacctagactttggtagactggcaactggttttggactggttcgt
gtccctaaaatgccagaattgaaaggaaaagtgctgacaaacttcattgccccagatgta
gactggatgaccataccttacaaagataaagccaaagagaaaatgagacaggaccaaatg
aaaaatggagaaattgtgaaaaagggaaaacctaaaaaacctttgcagacaaagtcatgg
tctcaacacaaagaccgtaaagacaggaaaaagaaacgtaaagagaaattgggtaaacgc
aagcaagagatatcagaggaagacattgatgatattgacaaggacttgaaattgatgaag
aaactaaaaaagggaaagatatctaaagaagactttgacaaagagtttgctgatgatagt
gactcggatgaaagttga
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