Ylistrum balloti (Ballot's saucer scallop): 132560413
Help
Entry
132560413 CDS
T11245
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
yba03041
]
132560413
Spliceosome [BR:
yba03041
]
Common components
Common spliceosomal components
General mRNP proteins
132560413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_10
RRM_7
RBD_DEAH11
RRM_8
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
132560413
NCBI-ProteinID:
XP_060081064
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MLNPFHFILYQLFWYPCRPFSCPDLIPCIINRLNFFCTRGKLKKYLILNFRKHRDRKDRD
RDREKSHSHREKDRKDRDRDRDRDRDRDRERKDRERKRSRSRDRDRERKERRRSRSKDRE
RRKEKKRSRSRERRKRSRSPSPIRFRDRRGRSSSRSPYRYTRQPGPELTPEERDARTVFC
MQLSARIRPRDLEEFFSSVGKVRDVRLIMDNKTRRSKGISYVEFQDTESVPLAIGLTNQK
LLGVPIIVQPSQAEKNRLANAANVLQKGNSGPMRLYVGSLHFNITEDMLRGIFEPFGAIE
DIKLIRDHETSRSQGYGFISFKDAEDAKKALEQLNGFELAGRPMKVGHVTERTGEAQGAS
MLDSDEMDRAGIDLGATGRLQLMAKLAEGTGFQIPDYAANALNAGSSGNASTGATTSMAA
VVGQPAPPTTAATTTTSAPPIATQCFMLSNMFDPNSESRTNWDQEIRDDVIDECNKHGGV
LHIFVDKASPQGNVYVKCPTIAAAVASVNALHGRYFGGKMITAAYVPLPNYHSLFPEATR
VNQLLLPSSQALQAGYPSGMFPNMPTAAPVMR
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatcccttccattttatcctatatcagttattttggtacccatgtcggcctttt
tcttgtcctgatttgattccttgtataataaacaggttgaactttttttgtactcggggg
aagttgaagaaatacttgattttaaatttcagaaagcatcgggatcgtaaagaccgggac
agagatagggaaaagagtcacagccatcgtgaaaaagacaggaaagatcgagatagagac
cgagatcgagacagggatcgtgatagagaaagaaaagaccgggaaagaaaaaggagtagg
agtagagaccgtgaccgtgaaagaaaggagcgtagaaggagtcgcagtaaggatagggaa
agacgaaaggaaaagaagcgaagtcgtagtcgggaaaggagaaagaggagcaggagtcca
tcaccaatcagattccgggatcgacgaggacgtagtagcagtagaagcccttacagatac
acaaggcagccaggtccagaattaacaccagaagaaagggatgctagaactgttttctgc
atgcagctttctgccagaattcgtccaagggatcttgaagaattcttttcttcagttgga
aaggtgcgagatgttcgtctgatcatggataacaagaccagaagatcaaaaggaatttcc
tatgtagagtttcaagatacagagtcagtgccattagccattggattaacaaaccaaaaa
cttttaggtgttccaattatagttcagccttctcaagcagagaaaaatagactagctaat
gcagcaaatgttctacaaaaaggcaactctggtccaatgagattatatgtgggatcttta
catttcaatattactgaagatatgttgcgaggaatattcgaaccatttggtgcaattgaa
gatatcaagttaattcgtgatcatgagacatcaaggtctcagggatatggctttatctct
ttcaaggatgcagaagatgccaagaaggccttggagcagttgaatggttttgaactggct
ggacggcccatgaaagttggccacgtcacagaaagaacgggagaagctcaaggagcatca
atgttagacagtgatgagatggacagggctggcattgacttgggagcaacagggcgacta
caactgatggcaaagttagcagaaggaactggatttcaaattccagactatgctgcaaat
gcattgaatgcagggagttcagggaatgcttctacaggagcaacaactagtatggctgca
gttgtaggccagccagctccaccaaccacagcagctaccaccaccacctccgctccacct
atagctactcagtgcttcatgttgtctaatatgtttgatcccaactcagaatcacggact
aactgggatcaggagatacgggatgatgtcattgatgaatgcaacaagcatggaggagtc
ctacatattttcgttgataaggcttcaccccaaggaaatgtctatgttaaatgcccaaca
atcgcagcagctgtagcatctgttaatgcactccatggccgatattttggaggaaaaatg
ataacagcagcctatgttcccttgcctaactaccactcgttgttcccggaggccacacga
gttaaccagctcttattgccctcatcacaagccctacaggctggttatccatcagggatg
tttccaaacatgccaacagcagctcctgtgatgcgatga
DBGET
integrated database retrieval system
