Ylistrum balloti (Ballot's saucer scallop): 132560638
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Entry
132560638 CDS
T11245
Name
(RefSeq) exosome complex exonuclease RRP44-like
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132560638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yba03019
]
132560638
Messenger RNA biogenesis [BR:
yba03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
132560638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
132560638
NCBI-ProteinID:
XP_060081285
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MLTSKTFVKKTKRGRIIKIVREHYLRDDITCGSESCQTCDPFDFGQPLSSEPENKSRLCL
TPHYLIPDTNVVLHQMDVLEDNVVQNVVILQTVLDEVRHRSSPGYKRLKSMLANPSKHFF
TFCNEFNKHTYVERQKGESSNDRNDRAIREATNWYQKHLRAESQADLIIDVVLLTNDADN
RRKAVQQGLKAFTVHEYVESLENCGHLADLLSQSQMSVHSQDRLLFPEHLPLSEIQRGIK
SGRYFQGSFMASRENYLEANVSIHDKDQMVFIQGHMNLNRAVHSDVVAIEMLPEEEWSCP
SSMVLEESTEKVVEDSMETEDNAVKRSKVPKELRQPTGKIVGIIKRNWRQYCGILRPSAM
KEGTRHIVVPAEKRIPKIRIETRQAAELVTQRIVVAIDNWPRNSRYPQGHFVRKLGSIGD
KETENEVLLLEHDVPHSNFSEAVLACLPKLPWIITDEDYKRRRDLRHIDICSVDPPGCTD
IDDALHCRELENGNLEVGVHIADVSHFIRPGTAIDKEASERGTTVYLTDRRIDMVPELLS
SNLCSLRSNVERFAFSILWELTHDAEIVTTSFTKSVIKSKAAFTYAEAQMKIDDTAQDDP
LTRSLRHLNRLAKILKQRRIDAGALTLASPEIRFHIDSETHEPIDVQAKQIMETNSMVEE
FMLLANVASAKKTLEEFPDCACLRRHPAPPPSNFDPVIKAAASKGFKIDVSKGKALADSL
EAAVVPSDPYFNTMLRIMTTRCMMQAVYFCSGMIPESEYFHYGLAAGIYTHFTSPIRRFS
DIIVHRLLAVCIGADASYPSLTDKHKTQVVCNNLNYRHKMAQYAGRASVNLHTHIFFKNR
ITNEEGYVLFVRQNALQVLIPKYGLEGTLYLSDGKSKSDPRFTYNEEASTQTCGNVTFHV
FDQVIVELSIDQSNVQHLKLCLKLVKPEIPNFSVSPLSTDDSEPPTKKQKTTPSKP
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgttaacttcaaaaacatttgttaagaaaacaaagagggggaggatcattaagattgtg
agggagcattatttgcgtgatgacataacttgcgggtcggaatcttgtcagacatgcgat
ccttttgacttcggccagccactgagctcggaacctgaaaacaaaagtcgtttgtgtttg
acgcctcattacctcataccagatacaaatgtagttctccaccagatggatgtcttggag
gacaatgtagtacagaatgttgtaattctacagactgtcctggatgaggtgaggcacaga
agttccccaggctacaagagactaaagagcatgttggccaacccaagcaagcatttcttc
actttctgtaatgaattcaataaacacacctatgtggagcgccagaaaggagagtcttcc
aatgacagaaatgaccgtgcaattagagaagcaacaaattggtatcaaaagcacctgcgt
gcagagagccaggcggatttgattattgatgttgtccttctgacaaatgatgctgacaac
aggaggaaagcagtacagcaaggccttaaagcattcacagtccatgagtatgtagaaagt
ttggagaactgtggacaccttgcagatcttttgtcacaatcacagatgagtgtgcattct
caggaccgcctcctattcccagaacacctcccactatctgagatacaacgtggaatcaag
tcagggcgatactttcagggaagcttcatggcaagtcgggagaactatcttgaggcaaat
gtcagcatccatgacaaagaccaaatggtattcatacaaggacatatgaacctgaacagg
gctgtacacagtgatgtggttgccatagagatgttaccagaggaggaatggagctgcccc
tcctcaatggtattagaggagtctacagagaaagtggtagaagacagtatggaaacagag
gataatgctgttaaaagatctaaagttcctaaagagttaagacagccgactggtaaaatt
gttggcatcatcaagagaaattggcggcaatattgtggaattctgcgaccctcagcaatg
aaggagggtacccgacatattgttgtaccagcagagaagaggattccaaaaatacgtatt
gaaacaagacaggcagctgagcttgtcacacagagaattgtagttgccattgacaactgg
ccacgtaactcccgctacccccagggtcattttgtgaggaagcttggtagcattggtgac
aaggagactgagaatgaagtcttgttactggaacatgatgttccccactctaacttctcc
gaagccgtgcttgcttgtcttccaaaactcccttggatcattacagacgaggattacaaa
cgtaggcgagacctgcgtcacatcgatatctgtagtgttgatcccccaggctgtacagat
atagatgatgctctccattgtcgagaattagaaaatggaaaccttgaggttggagtccac
attgccgacgtgtcccacttcatcagaccaggcacagccatcgacaaggaggcttctgaa
cgtggcaccactgtttaccttacagataggagaatagacatggtgccagaacttctcagc
tccaatctgtgttctctcaggtccaatgttgaaaggtttgcattttcaatattatgggaa
ttgacacatgatgctgaaatagtaacgacaagctttacaaagagcgttattaagtccaag
gcagcctttacctatgctgaagctcaaatgaaaatcgatgatacagcacaggacgacccc
ctcaccagaagtttacgacatctcaataggctagccaagattttaaaacagaggaggatt
gatgcaggtgctctgacacttgcttcacctgaaatccgattccacatcgacagtgagaca
catgaaccaatcgacgttcaggcaaaacagattatggaaacaaactccatggttgaagag
ttcatgttactggcaaacgttgcatcagccaagaaaacgttggaggagtttcctgactgt
gcatgtctgagacgacatcctgcaccgcctccgtccaattttgatccagtcataaaagct
gcagcgtcaaagggtttcaaaatagatgtgtctaaagggaaggctctggcagacagtttg
gaggcggctgttgtaccttcagatccctacttcaacacaatgctgcgtattatgactact
cgttgtatgatgcaggctgtttacttctgcagtggtatgatccccgagtctgagtatttt
cactacggtctggcagctggtatctatacccacttcacatctcctatcaggagattctcc
gacatcatcgtacacagactgctggctgtatgtataggagcagatgcttcttatcctagt
cttacagacaaacacaaaacacaggtagtgtgtaataatttgaattatcgacacaagatg
gcacagtatgctggtcgagcctcggtcaatctccatacacatatttttttcaagaatcgc
atcacaaatgaagaaggatatgtcctatttgtgcgacagaacgccctacaggtgcttatt
cccaagtatggtttagagggtaccctgtacctgagtgacggaaaatccaagtccgaccca
cgctttacatacaatgaagaggccagtacccaaacttgtgggaatgtgacattccatgtg
tttgaccaggtcatcgtagaactcagcattgatcagtccaatgtccagcacctaaagctt
tgtctcaagcttgtcaagcctgagataccaaattttagtgtttcaccgctcagcactgat
gacagtgaaccgccaacaaaaaaacagaagacaacaccaagtaaaccctag
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