Ylistrum balloti (Ballot's saucer scallop): 132561372
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Entry
132561372 CDS
T11245
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03018
RNA degradation
yba03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132561372
09123 Folding, sorting and degradation
03018 RNA degradation
132561372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yba03019
]
132561372
03041 Spliceosome [BR:
yba03041
]
132561372
Messenger RNA biogenesis [BR:
yba03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132561372
mRNA degradation factors
5'-3' decay
Lsm complex
132561372
Spliceosome [BR:
yba03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
132561372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
132561372
NCBI-ProteinID:
XP_060082079
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MLPLSLLRTAVNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEEVIQKSKGRGEMRGRGGPQRGRGGRGAFGSRGGGRGGGR
GGGQQRPGKGRGD
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgttacccctttctcttctgaggacggctgtgaaccaccccatgctggtggagttgaaa
aatggagagacgtacaatggtcatttggttagctgtgataactggatgaatatcaatctt
cgagaggtcatctgcacatcaagggatggtgatcgtttctggaggatgccagaatgttac
atccgaggcagcactatcaaatacttacgtatcccagatgaagtcatcgatatggtgaag
gaagaggtcattcagaagtccaaaggtcgtggagagatgagaggtcgtggtggcccacag
agaggtcgaggaggtcgaggtgcatttggaagcagaggaggtggaaggggcggaggccgt
ggtggtggccagcaacgacctggaaaggggaggggtgattga
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