Ylistrum balloti (Ballot's saucer scallop): 132561916
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Entry
132561916 CDS
T11245
Name
(RefSeq) gem-associated protein 5-like
KO
K13133
gem associated protein 5
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yba03019
]
132561916
03041 Spliceosome [BR:
yba03041
]
132561916
Messenger RNA biogenesis [BR:
yba03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132561916
mRNA cycle factors
P-body specific factors
132561916
Spliceosome [BR:
yba03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
132561916
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_WDR36-Utp21_1st
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_RIG_1st
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IP5PC_F
Beta-prop_EIPR1
Beta-prop_SPT8
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_DCAF12
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
132561916
NCBI-ProteinID:
XP_060082615
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MPEITIPASPNWYCSHVTDANSAGVYVFGARRDVLIYDVTCYPAKALGVFRAHRDKVSAV
GLNPYRDDSTKCCSGSEDGKLKIWNIESKEQIFEHNTHRGRVTAISWSPQQADLVLSADE
KGEIVSWQYLEGRLQTFSPENAAVMCLTCSPVAAGTVAIGYKTGLILILDVKRDGQILQR
LRGHDEDIQCLVWCPIIGENFKPPKPEYRDLDDPSNTVESTDISQASGGDDIVDFGADGH
LLASGSKDKTIRIWSTERGRQLLQLRVAKSGGRDQGNEYGGGKIWTTFVWQRNNPRHLIS
SSSGGDLLRWDITSQTPQKSKAFCAEHKKGSHFRMVFNLCLAGPTDDYLCSMSMDRQVIV
WNTNSGSLFGVLPTFGGFVYVVKSSPVDPGRVAVGVGDSMIRLWNLNNVNNLTDIKNLWQ
GIKAKVTALCWHPVKEGLLAYGTEDGRVGVYDTLSNRPPNISSTYHKKTVYVVSWGPHCA
DQEDGSGGYSLYSIGDGVILEHDVYNLQEEASDINLLIRQTNGKKIKLPVRSEISWSPDF
LFVAVGNDDGSVEIFKSPNFYLVATVHIHKKLINCIQWHPHITMATPSGSPYKYWIATAS
NEAGVYIVDLSSLLNKGEDPPADPVVVSESRQCLLGHVDRVTGVAWSPHIDQQLATVSYD
GQALVWDVDKNEMLACYQGHNGRLLCVQWNGLEEDLVMTGSDDFSLHQWRPSLHVPNPEN
AGRQRKQKHNKKKSKKSSSVVKEKSFPVVSPDTLVSADLSLTTEDRDGLEKILEEKRQQI
LRKDNLVLPEETDKTATEGMVTADGEPGTTSSNTTSNYSTVSTAADVTENGNSSGLPDLG
EPVTSEIGQEFTQKEIKSTSNTDRIRPTDITKDKKKKNWKVKSYFPLTGRAENRGKDFLH
DDLVYLAKKISASVKSIRFNQDVRGEDLALSQPSHVIVILAVSNLSGQM
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaatcacaataccagcatcaccgaattggtactgctcgcacgtgactgatgca
aacagtgctggtgtttatgtttttggtgcacggagagatgtactgatttatgatgtgaca
tgctacccggctaaagctctgggtgtctttcgtgctcacagagataaagttagtgctgtg
ggcctgaatccttatcgtgatgacagcaccaaatgctgcagtggatcagaagatggaaaa
ctgaaaatatggaacattgaatctaaagaacagatatttgagcacaatacacataggggg
agggtgactgctataagctggtcacctcagcaagcagacctggtgctgagtgcagatgag
aagggagaaattgtatcttggcagtacttagaaggtagacttcagacctttagtccagag
aatgcagccgtaatgtgtcttacctgttcaccagtagcagctgggacagtcgctataggg
tataagactggcttgattctgatcctggatgttaaaagagatggtcagattttgcaacgt
ctgcgtggccatgatgaagacattcagtgccttgtttggtgtcctatcattggggaaaac
tttaaacctccaaaaccggagtaccgggatctggatgacccctccaatacagtcgagtcc
acagacatcagtcaggcttcagggggagatgatatcgtagactttggtgcagatggccat
cttcttgcatctggcagcaaagacaagacaattcgtatctggagcactgaaaggggtaga
caactcctacagttacgggtggcaaagtctggtggccgagaccaagggaatgaatatggt
ggtggaaagatttggaccacatttgtatggcagagaaacaatcctcgccacttgatttct
agttcttcaggaggagatttgctgagatgggacattacatcacagactccacagaagagt
aaggcattttgtgctgaacacaaaaagggaagtcactttcgtatggtgttcaacttgtgt
ctagctggacccacagatgactatctatgttctatgtccatggacaggcaggtgattgtg
tggaacactaactcagggtctctgtttggggtcttacccacctttggcgggtttgtttat
gttgtcaagtcatcacctgttgatccaggaagagtggcagttggagtaggagacagcatg
atccgtctctggaacctcaacaacgtaaacaacctcacagacatcaagaatctatggcaa
ggaataaaggccaaggtcactgcattatgctggcacccagttaaggaaggtctgttggca
tatggtactgaggacggtagagttggtgtgtatgacactctctccaacaggcctcctaac
atatcctccacctaccataagaagacggtttatgtggtgtcatggggtcctcattgtgca
gaccaagaggatggatcagggggctacagtctgtacagtattggtgacggtgttatcctg
gaacatgatgtctataacctacaagaagaagccagtgacatcaacttgctcatacggcaa
accaacggtaaaaagattaagttgccagtacgcagtgagatcagctggagcccagacttt
ttgtttgttgctgttggcaatgatgatggatcggtggaaatcttcaagtctccaaatttt
tatttggttgccactgtccatattcataaaaagttgatcaattgcattcagtggcatccc
cacattaccatggcgacaccaagtggctctccctacaagtactggatagctacagcatct
aacgaggcaggggtgtacattgtagacctgtcatcactcctgaacaaaggtgaagacccg
ccagctgatcctgtggtagtgtctgagtccaggcaatgtctccttggccatgttgaccga
gtgactggtgtggcttggagtcctcatattgatcaacaactggccaccgtttcctatgat
ggtcaggctctcgtttgggatgtggataagaatgagatgctggcatgttaccaaggtcac
aatgggagactactctgtgtacagtggaatggcttggaagaagacttggtgatgactgga
tctgatgatttctctctccaccagtggcgaccttcactccatgtgccaaacccagaaaat
gctgggagacaaagaaagcaaaaacacaacaagaagaagtccaagaaaagttcctccgtt
gtcaaagagaaaagtttccctgtcgtcagtcctgatactctagtatcagctgacctatcc
ctaaccactgaagatcgagatggtctggaaaaaatacttgaggagaaacggcaacagatt
ttgaggaaggacaatttggtattaccagaagaaacagacaagacagccacagaagggatg
gtcacagcagatggtgaacctggtacaacttcctctaataccaccagtaattattcgact
gtctctacagcagctgatgtcacagaaaatggaaactcttctggtcttcctgaccttgga
gaacctgtaacctcagagataggtcaagagttcacccagaaggaaatcaaatcaacatcc
aacactgaccggattaggccaacagacataacgaaggacaagaagaagaagaactggaag
gtgaaatcttactttccactcactggacgagcagaaaacagaggcaaagatttcctccat
gatgatcttgtctaccttgccaagaaaatctcagcaagtgtcaaatctatcaggtttaat
caagatgtgaggggagaggacctggccttgtctcagccatcacatgtcatagtcatcctg
gctgtgtcaaatttatcaggacaaatgtga
DBGET
integrated database retrieval system
