Ylistrum balloti (Ballot's saucer scallop): 132562841
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Entry
132562841 CDS
T11245
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03440
Homologous recombination
yba03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132562841
03450 Non-homologous end-joining
132562841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yba03032
]
132562841
03400 DNA repair and recombination proteins [BR:
yba03400
]
132562841
DNA replication proteins [BR:
yba03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
132562841
DNA repair and recombination proteins [BR:
yba03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
132562841
BRCA1-C complex
132562841
NHEJ (non-homologous end-joining)
MRX complex
132562841
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
AAA_29
AAA_16
ABC_tran
AAA_13
AAA_22
Motif
Other DBs
NCBI-GeneID:
132562841
NCBI-ProteinID:
XP_060083601
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSTIEKMTIQGIRSFGPEDSDKQLIEFYSPLTLILGPNGTGKTTVIECLKYMTTGVMPPG
SKGGAFVHDPKVAHEREVKGQIRLQVKDVARQTVIVQRSLQVTQKLKNITMRTLEGVITR
RDAAGEKKSISSKCAEMDREMITSLGVSKPVLENVIFCHQEESNWPLSEGKSLKEKFDAI
FASTRYVKALDTIMKLKKSQDLDLKLLRQDITYSKQHKDKAAQLDADMNELEVKLEASKE
SVVKVAEKLVPIEEKLDQISVKAGEIYKIQTDVTKHQSELKQMEKAAEELQENIDNEFQG
STEELKKVLADFQSKVQEREEKLQEYQRRKEDLSRDVDRVVKNKNDTLVDVSKLEQEAQN
HKENTKRRDALIRQMADKYEFDGFSRGEITEEKYRQFVENIREKLVTMVEEGKQLKADFE
KQEAELQQKMDDLRESKTKLEQNERIKKNMMADNTDKMKQINRKLSQVEASAGKRDQLTR
ELKRADHDLQMVEESLDVEKTKQEISQLIKDKTKLDEQIGALSSEMNRLHLQSSAQAQLD
VLKKDKISKEETIRRLRTKHEDTLSYLMGDVPKSNIRGQLDSYITSQNESVKKLSQDLRK
SQTSLSSKEAEKKMMSEQLRKKEDDLKNMEEKIFSVCGSQNFEDGMAVLQNKKAQCQDSK
GSLLGAEHFYKKYVEKLEQEEPCCPLCRREFDTEQETKELVLELKEKLRQVPAKLRKAEK
DLLEFEKKYDAMMQLKPLKENMSILEETEIPEMKSKVRKTNEEIEKLRTTIADLTDDHET
KEQDEDMAKQIQPDIVLMDRYNGEVTELDKKIATQAANLSGGDSGRTLQNVINEKEDVQM
KVDTITRKLDHKRQKVNDHSEEVQRLKSNINSLREEKLQIDNDLQQRYKLEEDKAHLLSE
NEIYEKDIKEAATQIRPLQNQIDRTVKEKQDVVEAKEDQMEQTKVMIDKVKNDATKVKNV
NQDMKAYIQSGKEETLEQKREDLKKIEKRLEKKEDEQEKVNSGIEKLNKDLATQQVRERE
LLDNLALRKKQQEIEKMVKDLTELRKQLGGVDAYDLERDRKRLINQQEDLIKEKHLVVGR
QRGFEDQIRALKRELQDDMYKDASQKYRDKMILLRTTELANSDLEKYYKALDKAIMSYHS
LKMDEINKIICELWRNTYRGNDIDTIEIRSDEDDAGIMKTRRTYNYRVVMVKSGAVLDMR
GRCSAGQKVLASLIIRLALAETFCLNCGVLALDEPTTNLDRENIESLAYALVEIIKSRKE
QRNFQLVVITHDEDFVELLGRSDYVDWFFKVRKDQNGCSRLVKAKVQDLHAR
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaattgaaaagatgacaatccagggaatccggagttttggtccagaagactcc
gataaacagttgatagagttttacagtcctctgactctgatactgggaccaaatggaact
gggaaaactacggttatagaatgtctgaagtatatgaccacaggggtgatgcctcctgga
tcaaagggcggagcttttgtacatgacccaaaggtggcacatgaaagagaggtcaaaggt
caaatcaggcttcaggtcaaggatgtagccagacaaacagttattgtacaaagaagttta
caggtcacacaaaagttgaagaatatcacaatgagaaccctggaaggagtgatcaccaga
agagatgcagcaggggaaaagaaaagtatcagctccaagtgtgcggaaatggatcgtgag
atgataacatcattaggtgtatctaagccagttctggagaatgtaatcttctgtcaccaa
gaggaatctaactggccgctcagtgagggcaagtcactgaaggagaaatttgatgccatt
tttgcatcaactagatatgtgaaggccctcgacactattatgaagttaaaaaagagtcag
gacctagacctgaaactgttgagacaagatatcacctactctaaacagcacaaggataaa
gcagcacagctggatgctgatatgaatgaacttgaggtcaagttagaagcatctaaggag
tcagtggtcaaggtggcagagaagttggtaccaattgaggaaaaactagaccaaatcagt
gtaaaagcaggtgaaatttacaaaattcaaacagatgtcactaaacatcagagtgaattg
aaacagatggagaaggcagctgaggaactacaggaaaatattgataacgaattccaaggc
tccactgaggaactaaaaaaagtccttgcagattttcagagcaaggttcaggagagggag
gaaaaactacaagagtatcagcgtcgcaaagaggacctttcaagagatgttgaccgtgtg
gtaaagaataaaaatgacaccctggttgacgtaagcaaactggaacaggaggcccagaat
cataaagaaaataccaagagacgagatgccttgattcgacaaatggctgacaagtatgaa
tttgatgggttttcaagaggtgaaattactgaggagaagtatcgtcaatttgttgaaaat
atccgcgagaaacttgttacgatggtagaagaagggaaacaactcaaagcagactttgaa
aaacaagaagcagagctacaacagaagatggatgatttgagagagagtaaaaccaaactg
gaacaaaatgaacgcatcaagaaaaacatgatggcagacaacacagacaagatgaagcag
ataaacaggaagttaagtcaggtagaggcctcagcgggtaaacgggaccagctgactcgg
gaactcaagcgtgctgaccatgacctgcagatggtagaagaaagcctagacgttgaaaag
accaaacaagaaatctcacagcttatcaaggacaagacaaaactagatgaacagataggg
gcactaagttcagagatgaaccgcctgcatctccagtcgagtgcccaagcacaattagat
gtgctgaagaaagacaagatatctaaagaagagacaatacgacgtctgcgaaccaaacat
gaagacacgttatcctacttgatgggggacgtaccaaagagtaacatccgcggccagctg
gacagctatatcacgagtcagaatgaatctgtgaagaaactctcacaagatcttcggaaa
tctcagacatcgctgtcatctaaagaagcagagaaaaagatgatgagtgaacagctgcga
aagaaagaagatgacttaaaaaacatggaagagaagatattttctgtgtgtgggagtcaa
aactttgaggatgggatggcagttctgcagaataaaaaggctcaatgtcaagattccaag
ggatctctgttgggtgctgaacatttctataagaaatatgtagagaaattggaacaggaa
gaaccgtgctgccctctttgtcgtcgtgaatttgataccgaacaggaaacaaaagaactt
gtcctagagctgaaggaaaagcttcgacaagttcctgccaaactgaggaaggcagaaaag
gacttattggagtttgagaagaaatatgacgctatgatgcaacttaaacctctcaaagaa
aatatgagtatactggaggaaacggaaatcccagaaatgaagagcaaagtgagaaagaca
aatgaagaaatagaaaaactgaggacaacaatagctgatttgactgatgaccacgagaca
aaggagcaggatgaggacatggccaaacagatccagccggacattgtcctcatggatcgt
tataacggtgaagtcacggaactggataaaaagattgccacacaagcagctaatctgtca
gggggagactcaggaagaactcttcaaaatgtcattaatgaaaaggaagatgtacagatg
aaagtagatacaattacaaggaaattggaccacaagagacaaaaagtaaatgatcattct
gaggaggtgcagcgtttgaagagcaacattaactctttgagagaagaaaagcttcagatt
gataatgatctccagcagaggtacaaattagaggaagacaaagcacatcttctcagtgag
aatgagatctatgagaaagatatcaaggaggcagccacacagatacgaccacttcagaac
cagatagacagaactgtgaaagagaagcaggatgttgtagaagctaaagaagaccagatg
gaacaaaccaaagtcatgattgacaaggtcaaaaacgatgctacaaaggtgaagaatgtg
aaccaagatatgaaggcatacattcagtctggtaaagaagagacacttgagcaaaagaga
gaagacctcaaaaagattgaaaaacgacttgaaaagaaagaggatgaacaggaaaaagtg
aattctggaattgaaaaactcaacaaggaccttgctacacaacaggtacgggagagggaa
ttactagacaacttagccctgaggaagaaacagcaagaaatagagaaaatggtgaaagat
ctgactgaactccgaaaacaattgggaggagttgacgcttacgatcttgaacgagatcgc
aaacgtctgattaatcaacaagaggaccttatcaaagagaaacacttggtagttggacga
cagcgaggttttgaagaccagattcgagcactcaagagagaacttcaggacgatatgtac
aaagacgcctcacagaaataccgtgacaagatgattctgctcaggacaactgagctagct
aacagtgacctggagaagtattacaaggccctcgataaggctattatgagttatcatagt
ctgaagatggatgaaatcaacaaaataatctgcgaactttggaggaacacataccgcggt
aacgatattgacacgattgagatcaggtcagacgaagatgatgcaggaatcatgaagacg
aggcgaacatacaactacagagttgttatggtgaaaagtggggctgtgctggatatgaga
gggcgttgtagtgctggtcaaaaggtactcgcctcactaataatccgccttgctctagcc
gaaacattctgcctgaactgtggagtgctggcactagacgaaccgaccacaaacctggac
agagaaaacattgagagcttggcttatgcacttgttgagatcataaagagcaggaaggag
cagagaaactttcagctggttgttattacacacgacgaggacttcgtagaactgctaggg
cggtctgactatgtcgactggttcttcaaagtccgcaaagatcaaaatggatgttcacgg
ctggtcaaggctaaagtacaagacttgcatgctcgttga
DBGET
integrated database retrieval system
