Ylistrum balloti (Ballot's saucer scallop): 132563209
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Entry
132563209 CDS
T11245
Name
(RefSeq) E3 ubiquitin-protein ligase parkin-like
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba04120
Ubiquitin mediated proteolysis
yba04137
Mitophagy - animal
yba04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132563209
04120 Ubiquitin mediated proteolysis
132563209
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
132563209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
yba04131
]
132563209
04121 Ubiquitin system [BR:
yba04121
]
132563209
03029 Mitochondrial biogenesis [BR:
yba03029
]
132563209
Enzymes [BR:
yba01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
132563209
Membrane trafficking [BR:
yba04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
132563209
Aggrephagy
Other aggrephagy associated proteins
132563209
Xenophagy
Other xenophagy associated proteins
132563209
Ubiquitin system [BR:
yba04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
132563209
Mitochondrial biogenesis [BR:
yba03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
132563209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
IBR
IBR_1
ubiquitin
Rad60-SLD
Ribosomal_S27
Dsc3_N
FYVE_CARP1-2
ATP1G1_PLM_MAT8
GABP-alpha
Motif
Other DBs
NCBI-GeneID:
132563209
NCBI-ProteinID:
XP_060083944
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MFTALRNRSGLQMSTILLTVKFSSSCSCPVEVDIDSSILDVKSTLSKQLQIPTDEIQIIL
AGRVLEDKSTIKDLCISNCSVLHAFQQKQPEIDIKLREGAVGGDTSTTFRKVEPYYQYFV
YCKKCQCLQPGKLRVRCQACNDGYIILSRDPENFDDVLQSGRIQGECKSEQCNGQQREAN
FFFKCTGHRSEEGDTAAVLKHTRPNRKRRACIVCSDIGSPVMVFPCERHHVICLDCFKSY
GVVRLNDRSFTEDENIGYSLPCPVGCRNSLLEDAHHFCLLGVDQYERYKNFATEEYVLQN
GGVLCPAVGCGAGFLLAEVSRKVTCPTCQYTFCGECKLEYHEDPDCQALVIQESSSQNYI
VSEEQELRARWNLESLETIGRISKPCPNCKTNTEKAGGCMHMSCSRCYFEWCWMCEKEWT
RDCQGNHWFG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgttcacggctctcagaaatagaagtgggctccagatgtccaccatacttcttactgta
aagttcagctcttcatgttcctgtcctgttgaagtggatatcgattcaagtattctcgat
gtgaaatcaaccttgtctaaacaactccagattcccacagatgaaatacagatcattcta
gcaggaagagtcttggaggataaatctacaataaaggacctgtgtatcagtaactgttca
gttctacatgcctttcaacagaaacaaccagaaattgacatcaaactgagagaaggtgca
gtaggtggtgataccagtacaacatttaggaaagttgagccatattaccagtactttgtc
tactgtaagaagtgccaatgtctacaaccaggaaaactgagggtcagatgtcaggcctgt
aacgatggctacatcattctgtctagggatcctgagaattttgacgatgtgttacaaagt
ggacgtattcaaggagaatgtaaaagtgagcaatgtaatggacaacagagggaggcgaat
tttttttttaaatgtactggacatcgaagtgaagaaggtgatacagctgcagtgttaaaa
catacacgaccgaacaggaagcgtagagcttgtattgtctgctcagatatagggtctcct
gtaatggtgtttccatgtgaacgacaccatgtcatctgtcttgattgttttaaatcctac
ggagttgtgaggctaaatgacagaagtttcacagaagatgaaaatataggatatagtcta
ccatgtccagttggttgccgtaattctttacttgaagatgctcatcatttctgcctttta
ggagtcgatcagtatgaaaggtacaagaactttgctacagaggagtatgtgctgcagaat
ggaggagtgctgtgccctgcagtaggatgtggcgctggattccttcttgctgaggtttcc
cgcaaggttacctgccctacttgtcagtatacattctgtggagagtgtaagctggagtac
cacgaggatccagactgtcaagctttggtcatacaggagtcatcctcacagaattatatt
gttagtgaggaacaagagctaagggcaagatggaaccttgaatcactggaaacaatagga
cgtatttccaaaccctgtcctaactgtaaaaccaatacagagaaagcaggtggctgtatg
catatgagttgttcacggtgttattttgaatggtgctggatgtgcgaaaaagaatggaca
agagattgtcaaggcaatcactggtttggatga
DBGET
integrated database retrieval system
