Ylistrum balloti (Ballot's saucer scallop): 132565696
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Entry
132565696 CDS
T11245
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132565696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yba03021
]
132565696
03036 Chromosome and associated proteins [BR:
yba03036
]
132565696
Transcription machinery [BR:
yba03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132565696
Coactivators
SAGA/TFTC/STAGA complex
132565696
Chromosome and associated proteins [BR:
yba03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
132565696
STAGA complex
132565696
TFTC complex
132565696
SAGA complex
132565696
SLIK complex
132565696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
TFIID_NTD2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_RIG_2nd
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
WD_LRWD1
Beta-prop_DCAF12
PEP5_VPS11_N
PROPPIN
WDR54
Nucleoporin_N
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
132565696
NCBI-ProteinID:
XP_060086376
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MKRIRYEQIHSSVHQYLKRRQYSDHEVLEKKEHRWVHDVKDMALKSSASGETTTENILLY
SSISGDTTVCEQQFSRLKTYLSEAVDPYKNELTYILYPLFVHIYLHLLYNGHKAPAHKFY
SRHVKLFESAEELVVMEALHKLYTRTEVISCKEAMEFREHKFKVCLSQEALDYLMKYLKV
DDNMMLLQIFNQHLKVEVSKEDQRTLDLKENSNDKHESGGNERKRPTDIVRLLQQCIKQV
REGPPCMSSICFYTFLNAYQGLCTVDISPDRTLLSAGFEDSSVKLWSITPGLIQSYKTPT
DPSKLYLSADFWTSESSCDDDEDGDREDSNEDMKPQYREVATLRAHNGSVYKTCFSADSK
ALLSCSEDGSVRLWDLKTHTNKVCYRGHNYPVWDIDTSSIGNYFASASKDNTAKLWVTDR
TYPLRSFIGHSYDVDCVKFHPNCNYLATGSSDRTVRLWSLQDGKSVRLMQGHRSSVLALA
FSPNGQYLASAGDDRRIRVWDLTSGNIYKELKGHIDTIHCLSFNRDSTLLASGGLDCCIK
IWDIRKGVSLSNNINNNNSNNNNPSDGSISPEQLGSFPTKSAIVTYLQFAQHNLLYAAGS
I
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtatacgttacgagcaaatccactcctctgtgcatcaatatcttaagagaaga
cagtattctgaccatgaagttcttgagaagaaggagcacagatgggtacatgatgtaaag
gacatggctctcaagagttcagcttcaggggagacaacaactgaaaatattttgttgtat
agcagcatttcaggggacacaactgtttgtgaacaacaattttcaagattgaagacatac
ctaagtgaggctgttgacccttacaagaatgagctgacctacatactatacccactgttt
gtacatatctacctacatcttttgtacaatggacacaaggcaccagctcacaagttctac
agtcgccatgtgaagttatttgaaagtgctgaagaattggtagtgatggaagctctacac
aaattgtatactcgtactgaagtgatcagctgtaaggaagccatggagtttagagaacac
aagtttaaagtttgtctatcacaagaggccttggactacctgatgaaatacctcaaggtt
gacgacaacatgatgttattacaaattttcaatcaacatttaaaagttgaagtatcaaaa
gaagaccagcgtacacttgaccttaaagagaattcgaatgacaagcatgagtcaggtggt
aacgagagaaaacggcctacagatatagtgagattacttcaacaatgcataaaacaagtg
cgtgaaggaccaccttgtatgtcctccatatgtttctacacttttctcaatgcctatcaa
gggctgtgtacagttgacatatcaccagacaggacacttttaagtgctgggtttgaggat
tcatctgtgaaattgtggagcattacacctggccttatacagtcctacaaaacaccaaca
gatccctccaagctgtacttgtctgctgacttctggacttcagagtcatcatgtgatgac
gacgaggacggagatcgagaagacagcaatgaggacatgaagccccagtaccgtgaggtg
gcaacactgagagctcacaatggttctgtatacaagacttgcttcagtgctgattccaaa
gctttactctcatgttcagaagatggatcagtacgtctctgggacctgaaaactcacacc
aacaaagtctgttacagaggtcacaattaccctgtgtgggacattgacaccagttcaatt
ggaaattactttgcgtcagcatcaaaggacaatactgccaaattatgggtcactgaccgc
acttatccattgaggtcattcatcggtcattcctatgatgtggattgtgtcaagttccat
cccaactgtaactacttagcaacgggctccagtgaccggactgtccgattgtggagtctc
caggatgggaagtctgtccgactgatgcagggacaccgtagctctgtacttgccctggca
ttctcacccaatggacagtacctggcctctgcaggtgatgatcgtaggattcgggtgtgg
gacctcacctctggaaacatttacaaggaattaaaaggacacatagacacaatacactgt
ctaagcttcaacagagatagtaccctgctggcttcaggtggcctcgactgttgtataaag
atctgggacatacgaaaaggtgttagtttgagtaacaacatcaacaacaacaacagcaat
aacaacaacccatctgatggcagcatttctccagaacaattaggatcatttccaacaaag
tcagcaatagtgacatatttacagtttgcacaacataatcttctatatgctgctggcagc
atttga
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integrated database retrieval system
