Yersinia canariae: F0T03_00135
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Entry
F0T03_00135 CDS
T06446
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
yca
Yersinia canariae
Pathway
yca03030
DNA replication
yca03410
Base excision repair
yca03420
Nucleotide excision repair
yca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F0T03_00135 (polA)
03410 Base excision repair
F0T03_00135 (polA)
03420 Nucleotide excision repair
F0T03_00135 (polA)
03440 Homologous recombination
F0T03_00135 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yca03032
]
F0T03_00135 (polA)
03400 DNA repair and recombination proteins [BR:
yca03400
]
F0T03_00135 (polA)
Enzymes [BR:
yca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F0T03_00135 (polA)
DNA replication proteins [BR:
yca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
F0T03_00135 (polA)
DNA repair and recombination proteins [BR:
yca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
F0T03_00135 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F0T03_00135 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Obc1_cap
Prok-E2_E
HHH_5
DUF2529
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QHB30770
UniProt:
A0A857ET55
LinkDB
All DBs
Position
26351..29149
Genome browser
AA seq
932 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNGSGEPTGAMYGVLNMLRSLLLQYRPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRTQIEPLHQMVKAMGLPLLVVSGVEADDVIGT
LAQEAEKAGHAVLISTGDKDMAQLVTPNITLINTMNNAILGPQEVCEKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDALFSNLDKIATLTFRGAKTMSAKLEQNK
DVAYLSYKLATIKTDVELDVTCDELKVSAPDDEQLHQLFSRYEFKRWLADVEAGKWLDAK
KDRPAAQTSNKAFVAAESAPVAEVTAVLSQENYQTILDETSLNDWIERLKKAEVFAFDTE
TDGLDTLSSNLIGLSFAVAPGEAAYLPLAHDYLDAPVQLDRDWVLAQLKPLLEDDKALKV
GQNLKFDQSMLARYDIELRGIAFDTMLESYVLDSVAGRHDMDSLAERYLNHKTITFEEIA
GKGKNQLTFNQIALEQAGPYAAEDADVTLQLHLVLWPKLQQSEGLKRVFQEIEMPLLPIL
SCIERTGVLIDQNILAAHSKELTIRLDELERQAHELAEEPFNLASPKQLQAILYEKQKLP
ILKKTPGGAASTNEEVLAELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPVSGRVHT
SYHQAVTATGRLSSRDPNLQNIPVRNEEGRRIRQAFIAPEGYRIMAADYSQIELRIMAHL
SQDEGLLAAFAAGKDIHRATAAEVFGLPLEKVTNEQRRSAKAINFGLIYGMSAFGLARQL
NIPRGEAQRYMDLYFERYPGVLEYMERTRKQAADQGYVTTLDGRRLYLPDIHSRNATRRK
AAEREAINAPMQGTAADIIKRAMIAVDAWLQQEPEPLVRVIMQVHDELVFEVHESVLESA
EQKIRELMEQSMQLAVPLKVDVGVGYNWDQAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattgcagaaaacccattgatccttgttgacggttcctcttacctctatcgt
gcataccatgctttcccgccgttaaccaacggcagcggcgagccaacgggtgcgatgtat
ggcgtgttgaacatgttgcgcagtctgttgttgcaatatcggccaagccatgtggccgtc
gtttttgatgccaaaggtaaaacattccgcgatgaactttttgcggaatataagtcccac
cgcccaccgatgccagatgatttacggacccaaattgagccgcttcaccagatggttaag
gcgatggggttgcctttattggtggtttccggcgttgaggctgacgatgttatcggtact
ttggcacaagaagcggaaaaagcaggtcatgctgtattaatcagtactggtgataaagat
atggcgcaattagttacgccaaatatcactcttatcaatacaatgaataacgctatttta
gggccacaagaagtgtgcgaaaaatatggcgttcctcctgagctgattattgattttctc
gcattgatgggggattcctcagataatattccgggcgtaccgggcgtcggcgagaaaacg
gcgcaggctttattgcaaggtctgggcggattggatgcgctatttagcaatttggataaa
atagccacgctaacattccgtggtgcaaaaacaatgtctgccaaattagagcagaataaa
gatgttgcctatctctcctataaactggccactattaaaacggatgttgaactggacgtc
acttgtgatgagctgaaagtctcagcgccggatgatgagcaattgcatcaattattcagt
cgttatgaatttaagcgctggttggcagatgtcgaagccggtaaatggctggatgctaaa
aaagacaggccagcagcccagacaagcaataaagcttttgttgcagcagaatcagctcct
gtagctgaagttactgctgtgctctcacaagagaattatcaaactatcttggatgagaca
tctttaaatgattggattgagcggcttaagaaagcggaggtttttgcttttgatacggaa
actgacggtcttgatacgctcagcagcaatttaattggcctctcttttgctgtggcaccg
ggtgaggcagcttatttgccattagcacatgattacctggatgcacctgtacagcttgat
agggattgggttttggcccaacttaagccattactggaagatgataaggcccttaaagtg
gggcagaatcttaagtttgaccaaagcatgctggcgcgttatgacatagaactgcgcggt
attgctttcgatactatgctggaatcttatgttttagacagtgttgccggtcgacacgat
atggatagcttggccgagcgttatctcaatcataaaactattacttttgaagagatcgcc
ggtaaaggtaaaaaccaacttactttcaaccaaattgccttagaacaagctggcccttac
gcggcagaagatgcggatgttaccttacaattgcatttggtgttgtggccgaagctacag
caaagtgaaggtctaaagcgggttttccaagaaattgagatgcctttgctgccgatcctg
tcctgcattgagcgcactggtgtcctgattgaccagaatatattggcggcacattctaaa
gaactgactatccgccttgatgagttggaaagacaggctcatgaattggcagaagagccc
tttaatctcgcctcacctaagcaattacaggccattttgtatgaaaaacaaaaattgcct
atcttgaagaaaacaccaggtggcgctgcttcaaccaatgaagaggtactggctgaattg
gcattggattaccctttgccgaaagttattcttgaatatcgtggcctggcgaagctgaaa
agtacttataccgataaattgccgttgatgattaaccctgtttctgggcgagttcatact
tcttatcatcaggccgtcactgcgaccgggcgcttatcttcccgagatcctaatctgcaa
aatattccggtgcgaaatgaagaagggcgtcgcatacgccaggcttttattgccccagaa
ggttatcgcatcatggcggcggactattcacagattgagctgcgcatcatggcccatttg
tcacaggacgaagggttgctagctgcatttgcggccggcaaggatattcaccgcgcgacg
gcggcggaagtctttggtttacctctggaaaaagtcacgaatgaacaacgccgcagtgct
aaggccattaactttggtttgatttacggtatgagcgcatttggtttggcgcggcagttg
aacattcctcgtggggaagcgcaacgttatatggatctctattttgaacgctacccaggc
gtgctggaatatatggagcgcacacgtaagcaagctgctgatcaaggatatgtcacaacc
ctggatggccgtcgtctctatctgccagacattcactcacgtaatgcaactcgtcgtaag
gctgctgaacgcgaggctatcaatgcgccgatgcagggaactgccgctgatattattaag
cgcgcaatgattgcagtagatgcatggttgcagcaagaacctgagcctttggtgcgggta
attatgcaggtacacgatgaattggtatttgaagtgcatgaaagtgtattggaaagcgct
gagcagaaaattcgtgagctgatggaacaaagcatgcaactggcggtgccattaaaagtt
gatgtcggtgtgggctataactgggatcaagctcattag
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