Entry |
|
Symbol |
rhlB
|
Name |
(GenBank) ATP-dependent RNA helicase RhlB
|
KO |
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Organism |
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:yca00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F0T03_00855 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:yca03019]
F0T03_00855 (rhlB)
Enzymes [BR:yca01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
F0T03_00855 (rhlB)
Messenger RNA biogenesis [BR:yca03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F0T03_00855 (rhlB)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
complement(186158..187444)
|
AA seq |
428 aa
MSKTHLTEQKFSDFALHPLVIEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKT
LAFLASTFHYLLSHPAQEGRQTNQPRALIMAPTRELAVQIHSDAESLSQITGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPSVDQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPLQKTGHRIQEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILE
DFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA
CEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRLARTRTGNGPRRNSAPRRSGAP
RNNRKRPS |
NT seq |
1287 nt +upstreamnt +downstreamnt
atgagcaaaacacacttgaccgaacagaagttttccgacttcgccctgcacccgctagtt
attgaagctcttgaaaacaaagggtttcagtattgtacgccgatccaggcgttagcattg
ccactcaccctatctgggcgtgatgtagcgggtcaggcgcaaacagggaccggcaagacg
ctggcatttctagcgtctactttccattatttgctttctcaccctgcgcaagagggtcgc
cagactaatcagccacgcgcattgattatggctcccactcgtgaattagccgtacaaatt
cactccgatgcagaatcactttcccaaataaccgggctgaaattaggcttggcttacggt
ggtgatggctacgataaacagcttaaagtgctggaaagtggcgttgatattctgatcggt
actactggccgtttaatcgattacgcaaaacaaaattacattaatctcggtgcgattcag
gttgtggtgttagatgaagctgatcggatgtacgatctgggctttattaaagatatccgc
tggctgttccgccgtatgccttccgttgaccagcgtttaaacatgctgttctctgccaca
ctctcgtaccgggtacgtgaattagcattcgaacaaatgaataacgccgaatatgttgaa
gtggaaccgttacaaaaaaccggccaccgcattcaggaagagctgttctacccttcaaat
gaagaaaaaatgcgtctgcttcagacgttgattgaagaagagtggccagatcgctgcatt
atttttgcaaatactaagcatcgctgcgaagaaatttggggtcacttggctgctgatggt
catcgtgttggtctgctgaccggcgatgtcgcgcagaaaaaacgcctgagaattctggaa
gatttcaccaaaggtgatttggatattctggtcgccaccgatgtcgccgcccgtggtcta
cacattccactggtaacccatgtcttcaactatgacctacctgatgactgtgaagactat
gttcaccgcattggccgtactggtcgtgctggcgaaagtggtcattccatcagcctggct
tgtgaagaatacgccttaaacttaccggcaatcgagacctacactggtcatagcattcca
gtaagtaaatataatagcgatgcgctattaactgatctgccggcgccaaaacgtctggcc
cgaacccgcactgggaatggtccacgccgtaactctgccccacgtcgcagtggtgcaccg
cggaataaccgtaagcgaccgagctga |