KEGG   Yersinia canariae: F0T03_00855
Entry
F0T03_00855       CDS       T06446                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
yca  Yersinia canariae
Pathway
yca03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:yca00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    F0T03_00855 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:yca03019]
    F0T03_00855 (rhlB)
Enzymes [BR:yca01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     F0T03_00855 (rhlB)
Messenger RNA biogenesis [BR:yca03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     F0T03_00855 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C AAA_22 CCDC138_C
Other DBs
NCBI-ProteinID: QHB30895
UniProt: A0A857EVJ2
LinkDB
Position
complement(186158..187444)
AA seq 428 aa
MSKTHLTEQKFSDFALHPLVIEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKT
LAFLASTFHYLLSHPAQEGRQTNQPRALIMAPTRELAVQIHSDAESLSQITGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPSVDQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPLQKTGHRIQEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILE
DFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA
CEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRLARTRTGNGPRRNSAPRRSGAP
RNNRKRPS
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgagcaaaacacacttgaccgaacagaagttttccgacttcgccctgcacccgctagtt
attgaagctcttgaaaacaaagggtttcagtattgtacgccgatccaggcgttagcattg
ccactcaccctatctgggcgtgatgtagcgggtcaggcgcaaacagggaccggcaagacg
ctggcatttctagcgtctactttccattatttgctttctcaccctgcgcaagagggtcgc
cagactaatcagccacgcgcattgattatggctcccactcgtgaattagccgtacaaatt
cactccgatgcagaatcactttcccaaataaccgggctgaaattaggcttggcttacggt
ggtgatggctacgataaacagcttaaagtgctggaaagtggcgttgatattctgatcggt
actactggccgtttaatcgattacgcaaaacaaaattacattaatctcggtgcgattcag
gttgtggtgttagatgaagctgatcggatgtacgatctgggctttattaaagatatccgc
tggctgttccgccgtatgccttccgttgaccagcgtttaaacatgctgttctctgccaca
ctctcgtaccgggtacgtgaattagcattcgaacaaatgaataacgccgaatatgttgaa
gtggaaccgttacaaaaaaccggccaccgcattcaggaagagctgttctacccttcaaat
gaagaaaaaatgcgtctgcttcagacgttgattgaagaagagtggccagatcgctgcatt
atttttgcaaatactaagcatcgctgcgaagaaatttggggtcacttggctgctgatggt
catcgtgttggtctgctgaccggcgatgtcgcgcagaaaaaacgcctgagaattctggaa
gatttcaccaaaggtgatttggatattctggtcgccaccgatgtcgccgcccgtggtcta
cacattccactggtaacccatgtcttcaactatgacctacctgatgactgtgaagactat
gttcaccgcattggccgtactggtcgtgctggcgaaagtggtcattccatcagcctggct
tgtgaagaatacgccttaaacttaccggcaatcgagacctacactggtcatagcattcca
gtaagtaaatataatagcgatgcgctattaactgatctgccggcgccaaaacgtctggcc
cgaacccgcactgggaatggtccacgccgtaactctgccccacgtcgcagtggtgcaccg
cggaataaccgtaagcgaccgagctga

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