Yersinia canariae: F0T03_00865
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Entry
F0T03_00865 CDS
T06446
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
yca
Yersinia canariae
Pathway
yca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F0T03_00865 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yca03021
]
F0T03_00865 (rho)
03019 Messenger RNA biogenesis [BR:
yca03019
]
F0T03_00865 (rho)
Transcription machinery [BR:
yca03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
F0T03_00865 (rho)
Messenger RNA biogenesis [BR:
yca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F0T03_00865 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
QHB30897
UniProt:
A0A857ET56
LinkDB
All DBs
Position
188469..189728
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSDLITLGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTVAGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIATSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDF
NRSGTRKEELLTTTEELQKMWILRRILHPMGEIDAMEFLISKLATAKTNDQFFDNMRRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaacacgccggtttctgatctgataacacttggcgaaaat
atggggctggaaaacctagcccggatgcgtaaacaagatattattttctctatccttaag
cagcacgcgaaaagtggagaagatatcttcggtgacggtgtgttggagatattgcaggat
ggatttggtttcctccgttctgcagacagctcctacctcgccggccctgacgacatctac
gtatccccaagccaaattcgccgtttcaacctccgcactggtgataccgttgccggtaag
attcgtccacctaaagagggtgagcgttactttgcattgttgaaagttaacgaagttaac
tatgacaaaccggaaaatgcgcgtaacaaaattctattcgaaaacttaactccattgcat
gccaactctcgtctgcgcatggaacgaggtaatggttcgactgaagatttgactgcccgt
gtacttgatttggcatcgccaatcggtcgtggtcagcgtgggctgattgtggctccgcca
aaagcgggtaaaaccatgctgttgcagaatattgccaccagcattgcttacaatcaccct
gattgcgtattgatggtattgctgattgacgagcgcccggaagaagtgaccgagatgcag
cgtctggtgaaaggtgaagttattgcttcaactttcgacgagccagcatcccgccacgtt
caagttgctgaaatggttatcgagaaagcgaaacgtctggttgagcataaaaaagacgtt
atcattttactggactccattacccgtttggcccgtgcatacaacaccgtcgtgcctgct
tcaggtaaagttctgactggtggtgtggatgccaacgccttgcatcgtcctaagcgtttc
tttggtgctgctcgtaatgttgaagagggcgggagcctgaccatcattgccaccgcattg
gttgataccggttctaaaatggatgaagttatctatgaagaatttaaaggtaccggcaac
atggaactgcatctgtcgcgtaaaatcgcagagaaacgtgtgttcccagccattgatttc
aaccgctcaggcacgcgtaaagaagagctgctgacaaccactgaagagctgcaaaaaatg
tggatcctgcgtcgtatccttcatccaatgggtgaaatcgatgcaatggagttcctcatc
agcaaattggctacagcgaaaaccaacgatcagttcttcgataacatgagacgttcgtag
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