Yersinia canariae: F0T03_01010
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Entry
F0T03_01010 CDS
T06446
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
yca
Yersinia canariae
Pathway
yca03420
Nucleotide excision repair
yca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F0T03_01010 (uvrD)
03430 Mismatch repair
F0T03_01010 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yca03400
]
F0T03_01010 (uvrD)
Enzymes [BR:
yca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F0T03_01010 (uvrD)
DNA repair and recombination proteins [BR:
yca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F0T03_01010 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
F0T03_01010 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
PhoH
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QHB30921
UniProt:
A0A857EUV7
LinkDB
All DBs
Position
217800..219962
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AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNEKQREAVAAPRCNLLVLAGAGSGKTRVLVHRIAWLLSVENASPYSIIAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSDDQL
RLLKRLVKALNLDEKQWPPRQAMWYINGKKDEGLRPQHIESYGNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNNIQYAWIRLLAGDR
SNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILTAANTLIANN
DGRMGKNLWTDGAEGEPISLYCAFNELDEARFVVNRIKAWQDNGGALNDCAILYRSNAQS
RVLEEALLQTAMPYRIYGGQRFFERQEIKDALAYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVIRQTARDRQLTLWQSTRAMLQEKVLAGRAASALQRFVELVDSLAHETSDMPLHVQ
TDRVIRDSGLWSMYEQEKGEKGQARVENLEELVNATRQYSYQDEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLCYAESRRLYGKEVNHRPSRFIGELPQECVEEVRLRATVSRPVNHRSMG
TPMNENDSGFSLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFPGEGIKWLVAAYARLEAV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatctgctcgacagcctgaatgaaaaacaacgcgaagccgtggccgcg
ccacgctgcaacctgttggtactggccggtgcaggcagcggcaaaacacgggtgctggtt
catcgtattgcctggttgttatcggtagaaaatgcctccccatattccattatcgcagtc
acctttaccaataaagcggcggctgaaatgcgccaccgtattgaacatttgattggcacc
agccagggcggaatgtggattgggactttccacggtctggcgcatcggttgctgcgcgct
caccatatggatgccaatctgccgcaggatttccaaattctcgacagcgacgaccaattg
cgcttattaaaacgcttggttaaagccttgaatttagatgagaaacaatggccgccgcgt
caggcaatgtggtatatcaacggcaaaaaagatgaagggctacgaccacaacatattgag
agctatggcaatccggtcgaagctacgtggctgcgtatttatcaggcctatcaggaagcg
tgtgaccgcgcaggtttggtggattttgccgagctattattgcgtgcccacgagttgtgg
ctgaataagccacacattctgaatcattatcgcgagcgctttaccaacattctggtggat
gagtttcaggataccaataacattcaatacgcctggattcgcctgctggcaggggatcgt
tccaacgtgatgattgtcggcgacgacgaccaatcaatctatggctggcgtggggcgcag
gtggaaaacatccagcgctttctgaaagatttcccgggtgctgaaaccatccgattagag
caaaattaccgctcgaccagcaatatcctgacagcggcaaataccttaattgctaataat
gatggccgcatggggaaaaacctgtggaccgacggcgctgaaggtgagccgatttcactc
tattgtgcctttaatgaattagatgaagcccgttttgtcgtgaaccgcattaaagcttgg
caagacaatggtggtgcgctgaatgattgcgccatcttgtatcgcagtaacgcccagtca
cgtgttttggaagaggccttattacagaccgccatgccgtaccggatatatggcggtcag
cgcttcttcgaacgtcaagaaatcaaagacgcactggcttatctgcgcctcatttctaat
cgcaatgatgatgcggcctttgagcgggtcgtgaatacgccaacccgtggtatcggcgat
cgcaccttagatgttattcgccaaactgcccgtgaccgccagttaaccttgtggcagtca
actcgcgccatgttgcaggaaaaagtgctggcaggccgtgcggcttctgcattgcaacgt
tttgtcgagttagtcgactcactggcacatgagacgtcggatatgccgctgcatgtccaa
actgaccgagtgattcgtgactccggtttatggtcaatgtatgagcaggaaaaaggcgaa
aaaggtcaggcgcgggttgagaaccttgaagagctggtcaatgcgacccgccagtacagc
tatcaggacgaagatcaggatctgatgccattacaggcattcctctctcatgcggcgctg
gaggccggagaaggccaagctgatgcttatcaggatgcggtgcagctcatgactctccat
tcagcaaaagggttggagttcccgcaggtattcatcgtcggtatggaagagggcatgttc
ccgagccagatgtcattggatgaaggtgggcgtctggaagaagaacggcggctagcctat
gttggggtcacccgtgcaatgcagaaactaactctttgctatgccgagagtcgccgtctg
tacggcaaagaagtcaatcatcgaccatcacgttttatcggcgaattgccgcaggaatgt
gtcgaagaagtgcggttacgcgcaacggtctctcgtccggtaaaccaccgcagtatggga
acgccgatgaacgaaaatgacagcggcttctcactgggtcagcgagttcgtcatcctaag
tttggcgagggcactatcgtgaatctggaaggcagcggtgaacacagccggttgcaggtg
gctttccccggcgaggggattaagtggttggtggccgcttacgcccggctggaagccgtc
taa
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