Yersinia canariae: F0T03_01055
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Entry
F0T03_01055 CDS
T06446
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
yca
Yersinia canariae
Pathway
yca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F0T03_01055 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yca03019
]
F0T03_01055 (recQ)
03400 DNA repair and recombination proteins [BR:
yca03400
]
F0T03_01055 (recQ)
Enzymes [BR:
yca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F0T03_01055 (recQ)
Messenger RNA biogenesis [BR:
yca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F0T03_01055 (recQ)
DNA repair and recombination proteins [BR:
yca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F0T03_01055 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Peptidase_S66
zf-CXXC
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QHB30930
UniProt:
A0A857ETW8
LinkDB
All DBs
Position
227619..229451
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AA seq
610 aa
AA seq
DB search
MSTAAVINRELLAEQVLRDTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIP
ALVTDGLTLVVSPLISLMKDQVDQLLAYGVGAGCLNSSQTREQQLAVMDGCRSGQIKLLY
IAPERLVMESFLDQLHQWRPALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPHLPVIAL
TATADEATRGDIVRLLNLDQPLIQVSSFDRPNIRYTLAEKFKPLDQLWRFVQDQRGKSGI
IYCNSRAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGI
NKPNVRFVVHFDIPRTIESYYQETGRAGRDGLPAEAILLYDPADMAWLRRCLEEKPAGAQ
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGKQQSCGNCDICLDPPRRYDGLADAQKAL
SCVYRVGQRFGLGYIVEVLRGANNQRIREFGHDKLSVYGIGREQSHEHWVSVLRQLIHLG
LLSQNIAMFSALQLTEAARPVLRAELPLQLAVPRIQSLKVRSSANQKSYGGNYDRKLFAK
LRKLRKSIADEGNIPPYVVFNDATLLEMAEQMPITASELLSVNGVGQRKLERFGAPFMAL
IRDHVDNNDD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaccgcagcagtgataaatagggagttactggcagagcaagtattgcgagatact
ttcggctaccagcaattccgaccagggcaacaagaaattatcaacgccaccctatcaggg
caagactgtctggtagtgatgccaaccggtggtggtaaatccttgtgttatcagattccg
gcactggtgacggatggcttaacgctggtggtttcccccttaatttctctgatgaaagat
caggttgaccaactgctggcctatggcgtgggcgctgggtgtttaaactcatcacaaaca
cgtgaacagcaattggcggtgatggacggttgccgcagcggtcagattaaactgttgtat
atcgcgccagaacggttggtcatggagagttttcttgaccaattgcaccagtggcgtcct
gcgttattggcggtggatgaggcgcactgtatttcccaatggggccatgatttccgcccg
gaatatcgtgctcttggtcagctaaagcaacgtttcccccatttaccggtaattgcactg
accgccacggctgatgaagcaacgcgtggcgatatcgtgcggttactcaatctggatcag
cctttaattcaggtcagtagctttgaccgccccaatattcgctacactctggcagagaaa
ttcaaaccgcttgatcaactgtggcgttttgtccaagaccaacgtggtaaaagtggcatt
atttactgcaatagccgggcaaaagtggaagacaccaccgcccgtctacaaagccgtggc
ttaagtgtggcggcctaccatgctgggttggacaatgagcgtcgcgcgcaggtacaagaa
gcatttcaacgtgatgacttgcaagtcgtggtcgccaccgtggcgttcggcatggggatt
aacaaacccaatgtccggtttgtggtgcattttgatattccgcgcactatcgaatcttac
tatcaagaaaccggtcgtgctgggcgtgatggtttacccgccgaggcgatattgctgtat
gacccggccgatatggcgtggctgcgccgctgtttggaagaaaaaccggcgggcgcacag
caagatattgagcggcataaacttaatgccatgggggcttttgcggaagcgcaaacttgc
cgccgactggtgctgctgaactattttggtgagggtaaacagcagtcatgcggtaactgt
gacatctgtctggacccgccgaggcgctatgatgggctggcggatgcgcaaaaagcgctg
tcgtgcgtgtatcgagttgggcaacggtttggcttagggtatatcgtcgaggtgctgcgc
ggggccaataatcagcgtattcgtgagtttggtcatgacaagctgtcggtgtacggcatt
ggtcgcgagcaaagtcatgagcactgggtcagtgtcttgcgccaactgattcaccttggg
ttgttgagccaaaatatcgcaatgttttctgccttacagttgaccgaagccgcgcgcccg
gtgttgcgtgctgaattgccattacagttggcggtgccgcgtattcagagtttgaaagtg
cgtagcagtgccaatcaaaaatcctatggtggcaattacgatcgcaagttgtttgccaaa
ttgcgcaagttgcgcaagtctattgctgatgagggcaatattccgccttatgtggtgttt
aacgatgccactttgctggagatggctgagcaaatgcctatcaccgccagcgaactgttg
agtgttaatggcgtcgggcagcgtaagctggagcgctttggcgcgccgtttatggcgctg
atccgcgaccacgtagataataatgacgactaa
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