Yersinia canariae: F0T03_02850
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Entry
F0T03_02850 CDS
T06446
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
yca
Yersinia canariae
Pathway
yca00330
Arginine and proline metabolism
yca00480
Glutathione metabolism
yca01100
Metabolic pathways
yca01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
F0T03_02850 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
F0T03_02850 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
F0T03_02850 (speF)
Enzymes [BR:
yca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
F0T03_02850 (speF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
QHB31230
UniProt:
A0A857EV52
LinkDB
All DBs
Position
complement(589786..591945)
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AA seq
719 aa
AA seq
DB search
MKKLNIAASTSAITCFESQREVVDVLHTDFTDVAAVVLSVQDINNGVIESIHSLGLDIPI
FAAVCCEEELNSDVLPSLNGVFELCGDNTDFYGKQLESAADKYEKELLPPFFNTLKKYVE
MGNSTFACPGHQGGQFFRKHPAGRQFFDFYGETIFRSDMCNADVKLGDLLIHEGAPCDAQ
KHAAKVFNADKTYFVLNGTSASNKVATNALLARGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDAHCFEEKYLREQIRSVAPERANEARPFRLAIIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQIHKKDKHIKGQDRYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGKSGQRM
WLDCVKTGIEARKMILNTCSMIKPFVPVDVDGKLWQEYDTDAMAQDLRFFNFIPGEKWHA
FEGYEESQYFVDPCKLLLTTPGIDTNTGEYTASGIPATILANFLRENGIVPEKCDLNSIL
FLLTPAEDLAKMQHLVAQIARFERFIEEDALLCDVLPTVYRNNETRYKNYTIGKLCQEMH
DLYVSYDVKQLQKEMFRKQYFPKVMMNPQDANIEFVRGHAELVPLCKAEGRIAAEGALPY
PPGVLCVVPGEVWGGAAQRYFLALEESINLLPGFAPELQGVYLQVDEDRWNRAYGYMMK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaaatatcgcggcgagtacgtcagccataacttgttttgaatcacagcgt
gaagttgtagatgttttacacacagactttactgatgttgctgccgtggtgctttctgtt
caagacattaataatggtgtcattgaaagcattcattcattaggcctggacattcctatt
tttgcagcagtttgctgtgaagaagaactgaattctgatgtgttaccatctttaaatggt
gtatttgaactgtgcggtgacaatactgatttttatggtaaacaactggaatcagccgca
gataaatatgaaaaagagttactaccaccattcttcaatacattaaaaaaatatgttgaa
atggggaattctacgtttgcttgcccagggcaccaaggtggtcaattcttccgtaaacat
ccagcgggtcgtcaattttttgatttctacggcgaaactattttccgctctgacatgtgt
aatgctgacgtcaaattaggtgatttgcttattcatgagggcgcaccttgtgatgctcaa
aaacatgcagcaaaagtatttaatgccgataaaacctatttcgtactgaacgggacatct
gcttcgaataaagtcgcaacgaatgccctattagcgcgtggtgacctagtgctgtttgac
cgtaataaccataaatccaaccaccatggtgcgctgattcaagccggagctacacccgta
tatctggaaactgcccgtaacccatttggtttcattggtggtattgatgctcactgtttt
gaagaaaaatacctgcgtgaacagatacgtagcgtagcacctgaacgtgctaatgaagcc
cgtccattccgtctggcgattatccaattagggacttatgacggcaccatttataacgcc
cgtcaggtagtggataaaattggtcatctttgtgattatattctgttcgactctgcgtgg
gtgggctacgagcaatttattccaatgatgaaagattgctcaccattattgcttgaactg
aatgaaaacgacccaggcattatcgttactcagtcagtacataaacaacaagccggtttc
tcgcaaacttcgcaaattcataagaaagataaacatattaaaggccaagaccgttattgc
aatcataaacgttttaacaatgcctttatgttgcatgcatctactagcccattctatcca
ttattcgcagcattagatgtcaatgcgaaaatgcatgaagggaaaagtggccaacgtatg
tggctcgattgtgttaagaccggtattgaagcacgtaaaatgatcttgaatacctgtagc
atgattaaaccttttgttccggtagacgtggatggcaaactttggcaggaatatgacacc
gatgccatggcacaagacttgcgtttctttaattttattcccggcgaaaaatggcatgca
tttgaaggttatgaagagtcacaatacttcgttgacccgtgcaaactattattaaccaca
ccaggcattgatactaataccggtgaatatacagcatcgggtattccagcaactattctg
gctaatttcctgcgtgaaaatggtattgtgccagaaaaatgtgaccttaactctattcta
ttcttattaacaccagcagaagacttagcgaaaatgcaacatctggttgcccagattgcg
cgctttgaacgttttattgaagaagatgctctgttatgtgatgttttaccgacggtctat
cgtaataacgaaactcgctataaaaattatactattggtaaattatgtcaggaaatgcat
gacctttatgtcagctacgatgtgaaacaactgcaaaaagaaatgttccgtaaacaatat
ttccctaaagtcatgatgaatcctcaggatgccaatattgaattcgtccgtggacatgct
gaattagttccattatgtaaagcagaaggtcgaattgccgctgaaggcgcacttccttac
ccaccaggagtattgtgtgttgtccctggtgaagtatggggcggggcagctcaacgttat
ttcctggcacttgaagagagcatcaacttattgcctggctttgcacctgaattacaaggt
gtttatttacaagtcgatgaagacagatggaaccgcgcatacggctatatgatgaaataa
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