Yersinia canariae: F0T03_03255
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Entry
F0T03_03255 CDS
T06446
Symbol
lsrA
Name
(GenBank) autoinducer 2 ABC transporter ATP-binding protein LsrA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
yca
Yersinia canariae
Pathway
yca02010
ABC transporters
yca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
F0T03_03255 (lsrA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F0T03_03255 (lsrA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yca02000
]
F0T03_03255 (lsrA)
Transporters [BR:
yca02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
F0T03_03255 (lsrA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_22
AAA_29
RsgA_GTPase
MukB
ABC_ATPase
AAA_23
AAA_27
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QHB31298
UniProt:
A0A857EVF8
LinkDB
All DBs
Position
complement(668574..670139)
Genome browser
AA seq
521 aa
AA seq
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MSHTVTSPPPLLQVRGISKQFSGVVVLKSIDFTLQPGQVHALLGGNGAGKSTLMKIIAGI
LPPDSGTIEINGQPCLNLTPAKAHQLGIYLVPQEPMLFANLSVQENILFRLPKHQADKKK
MAQLLESLGCHLDLSVSAGSLDVADQQLVEIMRGLMRDSRILILDEPTASLTPAETHRLF
SQIKMLLQQGVGVVFISHKLPEIRQLADWVSVMRDGGIALSGVTSDFSTETIIQAITPQA
KNNELSDTQKLWLELPGNRRSQARAQSHQPVIQVTDLSGEGFAHISFEVHAGEILGLAGV
VGAGRTELAETLYGLRPASSGSVMLEEIDITTMKTVNRLATGLVYLPEDRQASGLYLDAP
LSWNVCSLTQSNQEIWTHPAQEAAILERYRRALNIKFNHLEQPVRTLSGGNQQKLLIAKC
LEANPLLLIIDEPTRGVDVAARSDIYQLIRSIADQHVAIIFISSDLEEVVQMADRVLVMH
QGEISGALEGSAMNVDTIMHLAFGEHHTDAHQSAENEGASC
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacactgtcacttccccgccaccgctgctgcaggtacgtggtatcagtaagcag
ttttccggcgtagtggtattgaaaagtatcgactttacgctgcaaccgggccaggtccat
gccctgctgggggggaacggcgcgggtaaatcgacgctgatgaaaatcatcgccgggata
cttccgccagacagcggtaccattgagattaatgggcaaccctgcttaaacctcaccccc
gccaaggcccaccagctaggtatttatctggtcccgcaagagccgatgctgtttgccaat
ttgtccgttcaggaaaatattctgttccggctgcccaagcatcaggctgataagaagaaa
atggcccagttgctggaaagtttgggctgccatttagatttatccgtcagcgccggttca
ctggatgttgctgaccaacaattagtagaaatcatgcgcggcctgatgcgtgattcccgc
attctaatccttgatgaacccaccgcctcgctaacacctgcggaaacccatcgtttgttc
agccaaataaaaatgttattgcagcaaggggttggggtggtttttatctcccacaaattg
cctgaaattcgtcaactggcagattgggtcagtgtgatgcgcgatggcggtattgcgctg
agcggggtcactagcgatttttccaccgaaaccattattcaggcgattaccccgcaagct
aaaaacaacgagttatctgatacgcaaaagttatggctagagttgcccggtaaccgccgc
tctcaagcacgggcgcaatcccatcaaccggtgatacaagtgactgacctgagcggtgaa
ggttttgcccatatctcttttgaggttcacgccggcgaaattctggggctggcgggtgtg
gttggtgcaggccgaaccgaattggctgaaacactatatggtttacggcccgccagcagc
ggcagtgtcatgctggaggagatcgacatcaccacaatgaaaaccgtcaatcgattggca
accggcctggtttatttgccagaagaccgccaagcctccgggctctatctcgatgccccc
ttgagctggaatgtttgttcattgacgcaaagtaatcaagagatatggactcacccggca
caggaagccgccattctggagcgctatcgtcgcgcgttgaatatcaaattcaaccacctc
gagcagccagttcgtactttatccgggggtaatcaacaaaaactgctgatcgccaaatgt
ctggaagccaacccgctgctactcattattgatgaaccgacccgtggtgtagatgtggcg
gcccgcagtgatatttatcaattgatccgcagcattgcggatcaacatgtggcgatcatt
tttatctcttctgatctggaagaagtggtgcaaatggcggatcgcgtgttggtaatgcat
cagggggaaatcagtggcgcactggagggcagcgccatgaatgtcgacacaattatgcat
ttggctttcggtgaacatcataccgacgcccatcagtctgctgaaaatgagggcgcatca
tgttga
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