Yersinia canariae: F0T03_03785
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Entry
F0T03_03785 CDS
T06446
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
yca
Yersinia canariae
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yca03021
]
F0T03_03785 (rapA)
Transcription machinery [BR:
yca03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
F0T03_03785 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QHB31386
UniProt:
A0A857EVD7
LinkDB
All DBs
Position
complement(792195..795101)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAIDVRMVTLLFPATGENRLYARNDSPITRVMFNPGDT
ITNHEGWQLKVEEVSEENGLITYIGTRLDTEETGVSMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYQSEQFRLPWSGLRGIRASLIPHQLHIAYEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLSGRAERILIVVPESLQHQWLVEMLRRFNLRFSLFDDSRYSEALL
DSTNPFETEQMVICSLDFVRRNKQRLEQLADASWDLLVVDEAHHLAWSEEAPSREYQVIE
QLAEHIPGVLLLTATPEQLGQQSHFARLRLLDPDRFHDYEEFVNEQQKYRPIADAVTLLL
GGEHLADDKLNLLGELINEQDIEPLLKAANSQSEDSEAARQELVTMLMDRHGTSRILFRN
TRNGVKGFPHRVLHQIKLPLPTQYQTAIKVSGIMGAKKTLEARAKDMLYPEQIYQEFEGE
NATWWNFDPRVEWLLNYLIANRGEKVLVICAQAATALQLEQVLREREAIRAAVFHEGLSL
IERDRAAAYFASEEDGAQVLLCSEIGSEGRNFQFACQLVMFDLPFNPDLLEQRIGRLDRI
GQNREIQIMVPYLENTAQAILVRWYHEGLDAFEHTCPTGRTIYDSGYQELIGYLATPNEQ
EGLDEFIHACRQQHEGLKLQLEQGRDRLLEMHSNGGEHGQELAQIIADQDNDVNLVSFAL
NLFDIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPQDGCTVTFDREQALSREDAQFVSWE
HPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTP
VRMLMDRNGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQQEVHAMLQQAEALIEEQAR
VLIDAAKHEADDKLSAELARLEALKAVNPNIRDDEIEALEHNRKLVLENLNQAGWRLDAI
RLVVVSHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgacacagaaagcgaacttggattgggt
actgtcgttgccattgacgtacgcatggtcaccttactgtttcccgcaaccggtgaaaac
cgcctttacgccagaaatgactcgcccatcacccgcgtcatgttcaatccgggtgatacc
atcactaaccacgaaggctggcagctgaaagtggaagaggtctctgaggaaaatgggctg
attacctatatcggcacccgcctggataccgaggaaaccggcgtttccatgcgtgaagtt
ttgctcgatagcaaactaacctttagcaagccgcaggacagactatttgccggtcaaatc
gatcgtatggatcgattcgccctgcgtttccgcgcccgtaaataccaaagtgagcagttc
cgtctgccctggagtggtttgcgcggtatccgtgccagtctaatcccacaccaattacat
attgcttatgaagtgggccagcgccatgcgccgcgcgtattactggccgatgaagtggga
ttgggtaaaaccatcgaagccggcatgattatccatcagcaactgctgtcaggccgcgct
gagcgcatcctcattgtggtgccggaaagtctgcaacatcagtggctggtcgaaatgctg
cgccgcttcaatctgcgcttctcactgtttgatgacagccgctattccgaagcgctactc
gacagcaccaatccatttgaaaccgaacaaatggtcatttgctcactggatttcgttcgt
cggaataaacaacgtctggaacagttggcagatgcatcctgggatctgttggtcgtggat
gaagcgcaccatctggcctggagcgaagaagccccgagccgtgaatatcaagtcattgag
caactggcagaacatatccccggcgtattgctattgaccgcaacccccgagcaattgggt
cagcaaagtcactttgcccgcttgcgcttgctggatccagaccgcttccacgattacgaa
gaattcgtaaatgagcagcaaaaatatcgtccaatcgcggatgccgtcacattgctgctg
ggcggcgaacacttagctgacgacaaactgaatctgctaggcgagcttattaatgagcaa
gatattgaaccgctgctgaaagcggcgaacagccaaagtgaagatagcgaagccgcacgc
caagaactggtaacaatgctgatggaccggcatggtaccagccgtatcttgttccgtaac
actcgtaatggggtaaaaggcttcccgcaccgtgtcttgcaccagattaagctgccattg
ccgactcagtatcaaacagcgattaaagtgtccggcattatgggggccaagaaaaccctg
gaagcgcgagccaaagatatgctttacccagagcaaatctaccaagaatttgaaggcgaa
aacgccacttggtggaactttgacccacgagttgaatggttgcttaactacctgattgcc
aatcgcggcgaaaaagtgctggtcatctgcgcacaagccgccacggcattgcagctcgaa
caagtgttacgcgagcgcgaagctatccgtgctgcggtgttccacgaaggtttatcgctg
attgaacgcgaccgcgcggcggcctatttcgcctctgaagaagacggcgcacaagtgctg
ttatgttcagaaattggctccgaaggacgtaacttccaatttgcctgccaattggtgatg
ttcgacctgcccttcaacccagacttgctcgaacaacgtattggccgtctggacaggatt
ggtcagaaccgtgaaatccagatcatggtgccttatctggaaaataccgcgcaggccata
ttggtgcgctggtatcacgagggtttggatgcttttgaacacacctgcccgactggccgc
accatctatgacagcggctatcaagagctgattgggtatctggccacaccgaatgagcag
gaaggattggatgaatttattcacgcctgtcgccaacagcatgaagggctgaaactccaa
ctggagcaaggccgagaccgcctgctagaaatgcactccaatggcggtgagcatgggcaa
gaactggcgcaaatcattgcggatcaagataatgacgtcaatttggtcagtttcgcgctg
aatctgttcgatattgtgggtatcaatcaagaagatcgcagtgacaacttgattgtgctg
acgccatctgaccatatgctggtaccggacttcccgggcttaccacaggatggctgcaca
gtgacattcgatcgcgaacaggccttatcacgcgaagatgctcagtttgttagttgggaa
catccgatcatccgtaatggtttggatctgatcttgtcaggtgataccggtagctgcgcg
gtttctttgttgaaaaacaaagcattaccagtgggtactttgctcgctgagctggtctat
gtggttgaagcacaggcgccgaaacacctgcaactgactcgcttcttaccaccaacaccg
gtgcggatgctgatggacagaaatggcactaatttggcggctcaggttgaatttgagagt
tttaatcgccaactgaatgccgtcaatcgccacacctctagcaagctggtcaacgcggtt
cagcaagaagtgcatgccatgttacaacaagcagaagcactgattgaagagcaagcgcga
gtgttaattgatgcggcgaaacatgaagccgatgataagctgagtgccgaactggcgcgt
ctggaagccctgaaagccgtaaatccgaatatccgcgatgacgaaatagaggctctggaa
cataaccgtaaactggtgctggaaaacctaaatcaggccggctggcgtttggatgccatc
cgtctggtggtagtctcacatcagtaa
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