Yersinia canariae: F0T03_04215
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Entry
F0T03_04215 CDS
T06446
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
yca
Yersinia canariae
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yca03016
]
F0T03_04215 (thpR)
Enzymes [BR:
yca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
F0T03_04215 (thpR)
Transfer RNA biogenesis [BR:
yca03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
F0T03_04215 (thpR)
BRITE hierarchy
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QHB31464
UniProt:
A0A857EWW6
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All DBs
Position
complement(895453..896025)
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AA seq
190 aa
AA seq
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MINTVDKTMNKRLFFALSLPDTVQQNIVQWRADNFPSEAGRPIAAANLHLTLAFLGEVSL
GKAQILQQQAGRISQSGFNVTLDDIGHWPSSGVVWLGCKNPPRGLLQLAQLLRSQAARSG
CHQTPLPFHPHVTLFRGAIRPVTIPAKTTNESFRANHFSLYESVYARGRTRYNIVQSWPL
AGTERTSDVI
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgattaatactgttgataaaaccatgaataaacgcctattttttgcgctgtcgctgccc
gataccgtgcagcagaacattgtgcaatggcgagcagataacttcccgtcagaagcggga
cgccctattgcggcggcgaatctccacctgacactggcgtttctcggtgaggtcagtctg
ggcaaagcgcaaatattgcaacaacaagccgggcgaatcagtcagtcaggttttaatgtg
acgctggatgatattggccactggcccagctccggagtagtctggctcggatgtaaaaat
cccccgcgagggctgttgcagttggctcaattattgcgttctcaagctgcacgcagtggc
tgccaccaaacaccgttgccatttcatccccatgtgaccttgttccgcggagctattcgc
cctgtcactatcccggctaaaaccaccaacgaaagcttccgggcgaaccatttttcgttg
tatgagtcggtatatgcgcgcggccgcactcgttataacattgtgcaaagctggccattg
gctggtacagaaaggacttccgatgtcatctaa
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