Yersinia canariae: F0T03_05560
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Entry
F0T03_05560 CDS
T06446
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
yca
Yersinia canariae
Pathway
yca03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
F0T03_05560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yca03019
]
F0T03_05560
03009 Ribosome biogenesis [BR:
yca03009
]
F0T03_05560
03036 Chromosome and associated proteins [BR:
yca03036
]
F0T03_05560
Enzymes [BR:
yca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
F0T03_05560
Messenger RNA biogenesis [BR:
yca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
F0T03_05560
Ribosome biogenesis [BR:
yca03009
]
Eukaryotic type
90S particles
RNase
F0T03_05560
Prokaryotic type
rRNA processing factors
F0T03_05560
Chromosome and associated proteins [BR:
yca03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
F0T03_05560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
DSRM_2
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
QHB31684
UniProt:
A0A857EXH9
LinkDB
All DBs
Position
1175079..1175759
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AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFQQQELLLQALTHRSASSKHNERLEFLGDSILSFVIANELYRRF
PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGIFLDSDIHMIERLILAWYHSRLEEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLNEPVIGTGSSRRKAEQAAAEQALKQLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaataaataggctacagcggaagctgggctacacttttcaacagcag
gagctcttgctgcaagcactgactcatcgtagcgccagtagtaaacataatgagcgtttg
gagttcctgggtgactctatattaagtttcgttatcgccaatgagttgtatcgccgtttt
ccccgtgttgatgaaggggatatgagtcggatgcgagcgacattggtcagaggaaatacg
ctagccgaaatggcccgtgagtttgacctcggtgaatgtttacgccttgggccgggtgaa
ttgaaaagtggcggtttccgccgtgaatcaattttggcagatactgtcgaagctttaatc
ggcggtatattcttagacagcgatattcatatgattgaacggctgattctcgcctggtat
cacagtcgattagaagaaatcagccctggtgataagcagaaagatccaaaaacgcgcctg
caagaatatttacagggccgtcatctgccattaccttcttatctggttgtgcaggttcgt
ggtgaagcacatgatcaggaatttactatccactgccaggtgagtggcttgaatgaaccg
gtaataggtaccggctcaagtcgccgtaaagctgagcaggcggcagcggaacaagcgctg
aaacagttggagcttgaatga
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