Yersinia canariae: F0T03_05860
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Entry
F0T03_05860 CDS
T06446
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
yca
Yersinia canariae
Pathway
yca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
F0T03_05860 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yca03400
]
F0T03_05860 (xseA)
Enzymes [BR:
yca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
F0T03_05860 (xseA)
DNA repair and recombination proteins [BR:
yca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
F0T03_05860 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QHB31737
UniProt:
A0A857EWF9
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All DBs
Position
complement(1245608..1246984)
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AA seq
458 aa
AA seq
DB search
MSQNSASSIFTVSRLNQTVRQLLEMEMGQIWLTAEISNFSQPSSGHWYFTLKDDRAQVRC
AMFRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ
LAAEGLFDQNHKQSLPSPARQVGVITSSSGAALHDVLQVLQRRDPSLPVIIYPTAVQGAD
APLQIVRAIQLANLRGECDVLIVGRGGGSLEDLWSFNDERVVRAIFNSRIPIVSAVGHET
DVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRSQQFTRLE
HRLQQQHPHLRLARQQTLLLKLQRRLEESAQSQIRLLSRRTERLQQRLVQAQPQGQIHRY
HQRVQQQEYHLRQALERQLNSYRQRFGIACSQLEAVSPLATLARGYSVTQTPEGALLKTT
KQVHTGDKLTTRLQDGWVESEITQINVVKKRRQRKTAD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaattctgcttcatcaatttttactgtcagccgccttaatcagacggtgcga
cagctgttggaaatggaaatgggccaaatttggctcactgccgagatttccaacttctcc
caaccttcgtctggtcactggtatttcaccttaaaagatgaccgggcgcaggttcgctgc
gcgatgttccgtaacacgaatcgccgcacaacgtttcgcccgcaaaatggccagcaagtg
ttggtcagggcgtcaatcacgctgtatgagccccgtggtgactatcagttaattgccgaa
agcatgcagcctgccggtgatggattgctgcaacagcagtttgagcagcttaaacagcaa
ctggccgcagaagggcttttcgaccaaaatcacaagcaatctctgcccagccccgccagg
caagtcggggtgataacctcatccagcggtgccgcgctgcacgatgttttgcaagttttg
caacgccgcgacccctctctgccagtgattatttacccgaccgcggtgcaaggcgctgat
gcgccacttcaaatagtccgagccattcaattggctaacctgcggggtgaatgtgatgta
ttgatcgtcgggcgcgggggtggttcactcgaagatttgtggagttttaatgacgagcgg
gtggtgcgcgctatttttaacagtcgaattcccattgtcagcgcggtcggccatgaaacc
gatgtcactatcgcggactttgttgcagatttacgcgccccaaccccttcagccgccgcc
gagcttgtcagccgtaaccaaattgagttagttaggcaaattcaggggcaacagcagcgg
atggaaatggcaatggattattatctggcgcagcgtagccagcaattcacccgccttgaa
catcggctgcaacaacaacatccgcatttacgactggcgcgtcagcaaacactcctgctg
aagttacagcgccgcttggaagaaagcgcacaaagccaaattcgcttattaagccggcgt
actgaacggctacaacagcgcttagtgcaagctcaacctcaaggccaaatccaccgttat
caccagcgggtgcaacagcaagaataccatttacggcaagccttagaacgccagcttaat
agctatcgtcagcgctttggtatcgcctgctcgcaattggaagcagtcagcccattggca
acgcttgcccgtggctatagcgtcacgcagacccctgagggtgctttgctcaaaaccacc
aaacaagtgcataccggcgacaagctcaccaccagattgcaagatggttgggtggaaagt
gaaatcacgcaaatcaatgtcgtaaaaaagcgccgccagcgcaaaacagccgactaa
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