Yersinia canariae: F0T03_08010
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Entry
F0T03_08010 CDS
T06446
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
yca
Yersinia canariae
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yca03400
]
F0T03_08010
DNA repair and recombination proteins [BR:
yca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
F0T03_08010
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Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
DUF7577
SWI2_SNF2
Zn_ribbon_3
AAA_30
zf-tcix
AAA_16
AAA_22
SLFN-g3_helicase
Zn_Ribbon_1
AAA
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QHB32107
UniProt:
A0A857EXG8
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All DBs
Position
complement(1688702..1690459)
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AA seq
585 aa
AA seq
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MAFTLRPYQQEAVDATLAHFRRHAEPALIVLPTGAGKSLVIAELAKLARGRVLVLAHVKE
LVAQNHAKYCAYGLEADIFAAGLQQRQSEGKVVFGSVQSVARNLSLFDSAFSLLIIDECH
RISDEDDSQYQQIIQHLRNTNPRLRLLGLTATPYRLGKGWIYQFHYHGITRGDGKSLFRD
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLTSNSDGMFREADLDRELKQQQRITPH
IVSQIIEYAVHRRGVMIFAATVEHAKEVYGLLPQGEAALVSAGTPPAERDALIAAFKQQK
LHYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKEDCLILDYAGNP
HDLFTPEVGTSKPHSDSQPVQVFCPDCGFANIFWGKCTESGEIIEHYGRRCQGWFEDEQG
ARAQCDYRFRFKSCPHCGAENDIAARRCHQCQEVLVDPDDILKAALKLKDALVLRCGGMS
LESGQDVKGEWLKITYYDEDGTNTSERFRLTTPAQRMAFEQIFLRPHQRAPGIVLKWQTA
ADIIAQQALLRYPDFVVARRRGQWWQIREKVFDYQGRFRRADSLA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctttacgttacgtccttaccaacaagaagcggtggatgcgaccctcgctcatttt
cgccgccatgctgagccagcgctgattgttttacccaccggggccggcaaaagtctggtt
attgctgaattagcaaagctggctcgtggacgcgttttggtattggcacatgtcaaagaa
ctggtggcacagaaccatgccaaatattgtgcctacggcttagaggccgatattttcgct
gcgggcctgcaacagcgccaaagcgaagggaaagtggtgtttggcagtgtgcaatccgtg
gcacgcaacctatcactgtttgatagcgctttttcgttgctgattattgatgaatgtcat
cgaatcagtgacgaggatgacagtcaatatcagcaaatcattcagcacttacgtaacacc
aacccgcgtttgcgcttgctagggctgacggcgaccccttaccgcctgggaaaaggctgg
atttatcaattccactatcatggcatcacccgtggcgatggaaaatccctgttccgagat
tgtatttatgaattacccctgcgctatatgattaagcacggatttttggtgccgcccgag
cgattagatatgccggtggtacaatacgatttcagccggctgaccagcaacagcgacggc
atgttccgtgaggcagatttagaccgcgagcttaagcaacagcaaagaattaccccgcat
atcgtgagtcagataattgaatatgccgtccatcggcggggtgtgatgatatttgccgcc
acagtcgaacatgccaaagaagtctatgggctcctgccccaaggcgaagccgcgctagtg
agtgctggcacaccaccagccgaacgagatgctttaattgccgcctttaagcagcaaaaa
ttacattacttagtcaatgtggcggtattgactaccggctttgatgctccacacgttgac
ctgattgccatccttcgcccaacagagtcggtcagcttgtatcagcaaattgtcgggcga
ggcctacggctttctccgggcaaagaagattgtctgattcttgattatgccgggaacccc
cacgatctcttcacaccggaagtgggtactagcaaaccccacagcgatagccagccagta
caggtcttttgtccggactgcggttttgccaatatcttctggggaaaatgtaccgagtca
ggcgaaattatcgagcactatgggcgtcgctgtcagggctggtttgaggatgagcaaggc
gcacgcgcacaatgtgattatcgtttccgctttaaatcctgcccacattgtggcgcagaa
aatgacattgcagcgcgccgctgtcatcaatgtcaggaagtgttagtcgacccggatgat
atactgaaagcggccctgaaattaaaagatgcgctggtattgcgttgtggcggaatgagt
ttggagagtggccaggatgtgaagggcgaatggctaaaaatcacttattatgatgaagat
ggcaccaataccagcgaacgctttcgcttgacgacccccgcccaacggatggcatttgag
caaatcttcctgcgccctcaccagcgggcgcccggtattgtactgaaatggcaaaccgca
gctgatatcattgcccaacaagcgctattgcgttaccccgattttgtcgtcgcgcgacgc
cgggggcagtggtggcaaatcagagaaaaggttttcgattatcaggggcgctttagacgg
gccgactcccttgcctga
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