Yersinia canariae: F0T03_11090
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Entry
F0T03_11090 CDS
T06446
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
yca
Yersinia canariae
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yca03016
]
F0T03_11090
Enzymes [BR:
yca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
F0T03_11090
Transfer RNA biogenesis [BR:
yca03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
F0T03_11090
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QHB32663
UniProt:
A0A857EZ19
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All DBs
Position
2373516..2375450
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHTQTPRVEGVVKGTEKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI
IATLHTDKDREIAEPETLVEPFLSRFVGRVQRKDDRLFIVPDHPLLRDAIQCRPERELTH
DFQTGDWAVAEMRRHPLKGDRAFNADLTAFITNGEDHFVPWWVTLARHNLEREAPAMVES
ALHDGQLQREDLTALNFVTIDSASTEDMDDALHVKDNGDGSVLLTIAIADPTAYVDENSE
LDLIARKRAFTNYLPGFNIPMLPRDLSDNLCSLRPNERRPVLVCRVTIAADGALGDDIHF
SAAWVESKAKLVYDEVSDWLEGLGDWQPQNADIAEQITLLKRVCETRSSWRQEHALVFKD
RPDYRFVLGEKGEVLDIIVEHRRIANRIVEECMIAANVCAAIALRDNLGFGIYNVHTGFD
PALVEQAANVLQANGVEASPQALLTLPGFCELRRHLDALPTQFLDSRIRRFQTFAEISTV
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIITGQQAEKPQDEITIQLAERRRLNRM
AERDVGDWLYARYLQPMAGTDTKFPAEVIDITRGGLRVRLLDNGAVAFIPAPFIHAVRDE
MVCSQETGTVQIKGETVYSQSDKIEVRIAEVRMETRNVVARPVV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccgctgctggcgcagctaaaacagcaacttcacactcagactccg
cgcgtcgaaggcgtcgttaaaggtactgagaaaggctttggctttcttgaggtagacggg
cagaaaagttactttattccgccgccgcagatgaaaaaagtcatgcatggcgatcgcatt
attgccacccttcacaccgataaagatcgtgaaattgctgagccggaaaccctggttgag
ccatttttatctcgctttgtgggccgggttcaacgaaaagatgaccgcctgtttatcgtt
cctgaccaccctttgctgcgtgatgctatccaatgtcgtccggagcgggaactgacacac
gatttccagaccggtgattgggctgtggctgaaatgcgccgtcacccattaaaaggtgac
cgggcctttaatgctgatttgactgcatttattactaatggtgaagatcatttcgtccct
tggtgggtaacattggcacgtcataatctggagcgtgaagcgcccgcgatggtcgaatct
gctctgcatgatggccagcttcaacgggaagatttgaccgcgcttaattttgtcactatt
gacagcgccagcaccgaagatatggacgatgctttgcatgtgaaagacaacggtgacggt
tccgtgttgttgaccattgccatcgccgaccctactgcttatgtcgatgaaaacagtgag
ttggatttaattgcccgcaagcgcgcatttactaactatctgccgggcttcaacatcccc
atgctgccacgggatttatctgacaatctctgttcgctgcgcccgaatgaacgccgccca
gtgttggtgtgccgagtcactattgctgctgatggcgcgctcggtgatgacatccacttc
tctgccgcttgggttgagtcaaaagccaagctggtttatgacgaagtttcagattggtta
gaggggcttggcgactggcaaccgcagaatgctgatattgctgagcaaatcacattacta
aaacgcgtgtgtgaaacccgtagcagttggcgtcaggagcacgcgctggtgtttaaagac
cggcctgactatcgcttcgtattgggcgaaaaaggcgaagtgctggatatcattgtcgaa
caccgccgcattgccaaccgtattgttgaagagtgcatgattgccgccaacgtctgcgcc
gccattgcgctgcgtgataatcttggttttggcatttacaacgtgcataccgggtttgat
ccggcgctggttgaacaagcggccaatgtattgcaagccaatggggtcgaagcttctccg
caagcactgctgactctgcccggattctgtgagttgcgccgtcatcttgatgcgctaccg
acgcagttcctcgacagccgcatccgccgtttccagacttttgcggaaatcagcaccgtt
cccggtccacatttcggtttagggcttgaggcctacgccacctggacatcgccaattcgt
aaatatggcgatatggtcaaccaccgtctgctgaaagccattattaccggtcagcaagcg
gaaaaaccacaggatgaaatcacgattcaactggccgaacgccgccggttaaatcgcatg
gctgaacgcgatgtaggtgattggctgtatgcccgttacttgcagccaatggcagggact
gataccaaattcccggcggaagtcattgatatcactcgcggtggtctgcgggtgcgctta
ctggataatggcgctgtcgcctttattcccgcgccatttattcacgcggttcgtgatgaa
atggtctgtagccaggaaaccggtactgtacaaatcaaaggtgaaacggtttacagccag
agcgacaaaatcgaggtgcgcattgccgaagtccggatggaaacgcgcaatgtggttgcc
cgcccggtagtctga
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