Yersinia canariae: F0T03_11200
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Entry
F0T03_11200 CDS
T06446
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
yca
Yersinia canariae
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yca03032
]
F0T03_11200 (topA)
03400 DNA repair and recombination proteins [BR:
yca03400
]
F0T03_11200 (topA)
Enzymes [BR:
yca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
F0T03_11200 (topA)
DNA replication proteins [BR:
yca03032
]
Prokaryotic type
DNA Topoisomerases
F0T03_11200 (topA)
DNA repair and recombination proteins [BR:
yca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F0T03_11200 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
QHB32683
UniProt:
A0A857EZ41
LinkDB
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Position
complement(2395108..2397723)
Genome browser
AA seq
871 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNNYVVKSSVGHIRDLPTSGSASKKSANSTEDKAKKADK
PKTKVKKDEKVALVNRMGVDPYHGWKAQYEILPGKEKVVAELKALAENADHIYLATDLDR
EGEAIAWHLREVIGGDDKRFSRVVFNEITKNAIQQAFNQPGELNINRVNAQQARRFMDRV
VGYMVSPLLWKKIARGLSAGRVQSVAVRLVVERERDIKAFVPEEYWELHADLLAKGEVPI
QMEVTHAHNKPFKPVNREQTHAALKLLENARYKVLDREDKPTSSKPGAPFITSTLQQAAS
TRLSFGVKKTMMMAQRLYEAGHITYMRTDSTNLSQDALTMVRGYIGDNFGDKYLPSAPNQ
YSSKENSQEAHEAIRPSDVNVLAEQLKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLT
VQAGDFQLRAKGRTLRFDGWTKVMPALRKGDEDRTLPVIEVGSDLDLQKLIPSQHFTKPP
ARYSEASLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENF
RELMNYDFTARMESGLDQVANNQAEWKAVLDGFFAEFSEQLEKAEKDPEEGGMRPNQMVM
TSIDCPTCGRQMGIRTASTGVFLGCSGYALPPKERCKTTINLVPDAEILNILEGDDAETN
ALRARRRCQKCGTAMDSYLIDNKRKLHVCGNNPACDGYEIEEGEFRIKGYEGPIVECEKC
GSEMHLKMGRFGKYMGCTNDECKNTRKILRSGEVAPPKEDPVPLPELPCEKSDAYFVLRD
GAAGVFLAANTFPKSRETRAPLVEELVRFKDRLPEKLRYLADAPVTDKEGNKTMVRFSRK
TKQQYVSSEKDGKATGWSAFYIDGKWVEAKK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgtaatagttgagtccccggcaaaagccaaaactattaataaatac
ttagggaataactacgtggttaagtccagtgtcggtcacattcgtgatttgccgaccagt
ggctcagccagtaagaagagcgctaactcaactgaagataaagccaagaaagccgacaag
cccaaaactaaagtaaagaaagacgaaaaggttgcattagttaaccgcatgggcgtcgat
ccttatcatggctggaaagcgcagtatgaaattttgcccggcaaagaaaaggtggttgcc
gagctgaaagcattagccgaaaacgctgaccacatctatctcgcaaccgaccttgaccgc
gaaggagaggctattgcctggcatttgcgggaagtgattggtggtgatgataagcgtttt
agtcgtgtggtatttaacgaaatcacaaaaaacgctatccaacaggcttttaatcagcct
ggtgaattgaatattaaccgggttaatgcccagcaagctcgtcgctttatggaccgggtt
gtgggttatatggtttctccactgttgtggaaaaaaattgcccgtggtctgtctgctggg
cgagtgcagtcggtcgccgtgcgtttagtggttgaacgcgaacgggatatcaaagcattc
gttcctgaagagtactgggaattgcatgctgatttgctggcgaaaggtgaagttcctatc
caaatggaagtcacccatgctcacaataaaccctttaaaccggtcaatcgtgaacagacc
cacgcagcgcttaaattgctggaaaacgcgcgctataaagtgctggatcgtgaagacaaa
ccgaccagcagcaagccgggtgcgccgttcattacttctacattgcagcaggctgccagt
acccgcctgagctttggtgtgaagaaaaccatgatgatggcgcagcgcttgtatgaagcg
ggccatatcacgtatatgcgtactgactcgaccaatttaagtcaggatgcgttgacgatg
gtgcgcggatatattggtgataattttggcgataaatacttgccatccgcacccaatcag
tacagcagcaaagagaattcacaagaagcgcatgaggctatccgcccttctgatgtgaat
gtattggctgaacagttaaaagatatggaagccgatgcccagaagctgtatcagctgatt
tggcgtcagtttgtggcctgtcagatgactccggccaagtatgattcgaccaccttgaca
gtacaggcaggcgatttccaactgcgggcgaaaggccgaactttacgatttgatggttgg
acgaaggtgatgccagcactgcgtaaaggggatgaagacaggactctgccagtgattgaa
gtgggcagtgacttggatttacaaaagctaatcccaagccaacacttcaccaagccgcca
gcgcgttacagtgaagcgtcattggtcaaagaattagaaaaacggggcattggccgccca
tctacctatgcgtcgattatttcgaccattcaagaccgtggctatgtccgcgtagaaaac
cgccgtttctatgctgagaaaatgggtgaaattgtaaccgaccgtctggaagagaacttc
cgtgagttgatgaattacgattttaccgcgcgcatggaaagtggtctggatcaggttgct
aacaatcaggccgagtggaaggcagtactggatggtttcttcgccgaattcagcgagcaa
cttgaaaaagccgaaaaagatcctgaggagggcggtatgcgcccgaatcaaatggtcatg
accagcattgattgcccaacttgtggccgtcagatggggattcgcactgccagtactggg
gtgttcctgggttgttcaggttatgcattgccgccgaaagagcgctgcaaaaccactata
aatctggtgccggatgctgagattcttaatatcctggaaggtgatgatgcggaaaccaac
gcattacgcgcccgccgtcgttgccagaaatgtggcacagccatggatagctatctaatt
gataacaaacgtaagttacatgtttgcggtaataacccagcatgtgatggttatgagata
gaagaaggtgagttccgcatcaaagggtatgaaggcccaatcgttgagtgcgaaaagtgt
ggttctgaaatgcacctgaaaatggggcgttttggcaagtacatgggttgtactaatgat
gagtgtaaaaatacccgtaaaattttgcgcagtggcgaagttgcaccgccgaaagaagat
ccagtccctttgccagaacttccttgcgaaaagtctgatgcctattttgtgttgcgagat
ggtgctgctggcgtattcttggcagccaataccttccctaaatcgcgcgaaacccgtgcg
ccattggtagaagagttggtgcgtttcaaggacagattacctgagaaattacgttacctg
gctgatgcgccagtgacggataaagagggtaataaaaccatggtgcgctttagccgcaaa
accaagcaacagtacgtttcgtcagagaaagatggcaaagccaccggttggtctgctttc
tatattgatggcaaatgggttgaagctaaaaaatag
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