Yersinia canariae: F0T03_11485
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Entry
F0T03_11485 CDS
T06446
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
yca
Yersinia canariae
Pathway
yca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F0T03_11485 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yca03400
]
F0T03_11485 (xthA)
Enzymes [BR:
yca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
F0T03_11485 (xthA)
DNA repair and recombination proteins [BR:
yca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
F0T03_11485 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
QHB32728
UniProt:
A0A857EZT0
LinkDB
All DBs
Position
2464105..2464911
Genome browser
AA seq
268 aa
AA seq
DB search
MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYHGQK
GHYGVALLTKNEPLAVRRGFPTDEEDAQRRIIMADIATPQGPLTVINGYFPQGESRDHPI
KFPAKERFYADLQQYLEQQLSADAQVLIMGDLNISPTDLDIGIGEDSRKRWLRTGKCSFL
PEERAWLERLQNWGLVDTFRAANPDCSNQFSWFDYRSRGFDENRGLRIDLLLASQPLAAR
CIATGIDYDIRGMEKPSDHAPVWSEFAL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgtctcttttaatatcaatggcctacgtgctcgacctcatcaactggctgca
ataatcgaacaacatcaaccggatgttatcgggcttcaggaaacaaaagtgcatgatgat
atgtttcccctggaagaggttagtcagcatggttatcacgttttttatcatggacaaaaa
ggccattacggcgttgcactgttaaccaaaaatgaacctttggcggttcgacgcggcttc
cctacagatgaagaagatgctcagcggcgcattattatggctgacatcgcgacgccccaa
ggccctttaactgtcattaatggctatttccctcaaggagaaagccgcgaccacccgata
aagtttcccgctaaagaacgtttttatgctgacttgcagcagtatttagagcagcaactt
tcggctgatgcccaagtgctgattatgggcgatttaaatattagcccaacggatttggat
attggtattggggaagatagccgtaagcgctggttgcgtaccgggaaatgttcattcctg
cccgaagagcgtgcatggctagagcgcttacaaaactgggggttggtggatactttccgt
gcagcaaatcctgattgcagcaatcaattctcatggtttgattaccggtcacggggtttt
gacgagaaccgaggtttgcgcatagatttattgctggcaagccaaccgctcgccgctcgc
tgcatcgccaccggtattgattacgacattagaggcatggaaaaaccgtcagatcacgct
ccagtatggtctgaattcgcactctaa
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